Cargando…

Interferon alpha-inducible protein 27 (IFI27) is a prognostic marker for pancreatic cancer based on comprehensive bioinformatics analysis

Accurate biomarkers to predict the genesis and progression of pancreatic adenocarcinoma (PAAD) are needed in the fight against this deadly disease. Here, we combined multiple datasets (GEO, TCGA and GTEx) to conduct a comprehensive analysis of pancreatic cancer. Through an in-depth analysis, we disc...

Descripción completa

Detalles Bibliográficos
Autores principales: Huang, Shu, Zhao, Jinglin, Song, Jianxin, Li, Yanqiong, Zuo, Rongxia, Sa, Yalian, Ma, Zhihui, OuYang, Hongmei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8806992/
https://www.ncbi.nlm.nih.gov/pubmed/34592906
http://dx.doi.org/10.1080/21655979.2021.1985858
_version_ 1784643591564427264
author Huang, Shu
Zhao, Jinglin
Song, Jianxin
Li, Yanqiong
Zuo, Rongxia
Sa, Yalian
Ma, Zhihui
OuYang, Hongmei
author_facet Huang, Shu
Zhao, Jinglin
Song, Jianxin
Li, Yanqiong
Zuo, Rongxia
Sa, Yalian
Ma, Zhihui
OuYang, Hongmei
author_sort Huang, Shu
collection PubMed
description Accurate biomarkers to predict the genesis and progression of pancreatic adenocarcinoma (PAAD) are needed in the fight against this deadly disease. Here, we combined multiple datasets (GEO, TCGA and GTEx) to conduct a comprehensive analysis of pancreatic cancer. Through an in-depth analysis, we discovered that the expression of the gene encoding interferon alpha-inducible protein 27 (IFI27) was significantly higher in pancreatic cancer tissues than that in normal tissues, and that higher expression of IFI27 was negatively correlated with the overall survival rate of pancreatic cancer patients. The functional annotation of IFI27 demonstrated relationships to cellular immunity and metabolism, especially glycolysis. Analysis of infiltrating immune cells displayed that higher expression of IFI27 expression correlates with decreased CD8 + T cells and increased M2 macrophages in the tumor immune microenvironment (TIME), then biochemical analyses of a mouse model and immunohistochemical (IHC) staining verified that glycolytic enzymes and M2 macrophages increased significantly in pancreatic cancer tissues. We speculate that IFI27 may affect the tumor microenvironment (TME) of PAAD by regulating cellular immunity and metabolism, thereby promoting the progression of pancreatic carcinoma and worsening the prognosis. These findings of our present study are solid evidence that IFI27 is a potential prognostic biomarker of pancreatic cancer and that it affects the tumor immune microenvironment.
format Online
Article
Text
id pubmed-8806992
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-88069922022-02-02 Interferon alpha-inducible protein 27 (IFI27) is a prognostic marker for pancreatic cancer based on comprehensive bioinformatics analysis Huang, Shu Zhao, Jinglin Song, Jianxin Li, Yanqiong Zuo, Rongxia Sa, Yalian Ma, Zhihui OuYang, Hongmei Bioengineered Research Paper Accurate biomarkers to predict the genesis and progression of pancreatic adenocarcinoma (PAAD) are needed in the fight against this deadly disease. Here, we combined multiple datasets (GEO, TCGA and GTEx) to conduct a comprehensive analysis of pancreatic cancer. Through an in-depth analysis, we discovered that the expression of the gene encoding interferon alpha-inducible protein 27 (IFI27) was significantly higher in pancreatic cancer tissues than that in normal tissues, and that higher expression of IFI27 was negatively correlated with the overall survival rate of pancreatic cancer patients. The functional annotation of IFI27 demonstrated relationships to cellular immunity and metabolism, especially glycolysis. Analysis of infiltrating immune cells displayed that higher expression of IFI27 expression correlates with decreased CD8 + T cells and increased M2 macrophages in the tumor immune microenvironment (TIME), then biochemical analyses of a mouse model and immunohistochemical (IHC) staining verified that glycolytic enzymes and M2 macrophages increased significantly in pancreatic cancer tissues. We speculate that IFI27 may affect the tumor microenvironment (TME) of PAAD by regulating cellular immunity and metabolism, thereby promoting the progression of pancreatic carcinoma and worsening the prognosis. These findings of our present study are solid evidence that IFI27 is a potential prognostic biomarker of pancreatic cancer and that it affects the tumor immune microenvironment. Taylor & Francis 2021-10-21 /pmc/articles/PMC8806992/ /pubmed/34592906 http://dx.doi.org/10.1080/21655979.2021.1985858 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Paper
Huang, Shu
Zhao, Jinglin
Song, Jianxin
Li, Yanqiong
Zuo, Rongxia
Sa, Yalian
Ma, Zhihui
OuYang, Hongmei
Interferon alpha-inducible protein 27 (IFI27) is a prognostic marker for pancreatic cancer based on comprehensive bioinformatics analysis
title Interferon alpha-inducible protein 27 (IFI27) is a prognostic marker for pancreatic cancer based on comprehensive bioinformatics analysis
title_full Interferon alpha-inducible protein 27 (IFI27) is a prognostic marker for pancreatic cancer based on comprehensive bioinformatics analysis
title_fullStr Interferon alpha-inducible protein 27 (IFI27) is a prognostic marker for pancreatic cancer based on comprehensive bioinformatics analysis
title_full_unstemmed Interferon alpha-inducible protein 27 (IFI27) is a prognostic marker for pancreatic cancer based on comprehensive bioinformatics analysis
title_short Interferon alpha-inducible protein 27 (IFI27) is a prognostic marker for pancreatic cancer based on comprehensive bioinformatics analysis
title_sort interferon alpha-inducible protein 27 (ifi27) is a prognostic marker for pancreatic cancer based on comprehensive bioinformatics analysis
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8806992/
https://www.ncbi.nlm.nih.gov/pubmed/34592906
http://dx.doi.org/10.1080/21655979.2021.1985858
work_keys_str_mv AT huangshu interferonalphainducibleprotein27ifi27isaprognosticmarkerforpancreaticcancerbasedoncomprehensivebioinformaticsanalysis
AT zhaojinglin interferonalphainducibleprotein27ifi27isaprognosticmarkerforpancreaticcancerbasedoncomprehensivebioinformaticsanalysis
AT songjianxin interferonalphainducibleprotein27ifi27isaprognosticmarkerforpancreaticcancerbasedoncomprehensivebioinformaticsanalysis
AT liyanqiong interferonalphainducibleprotein27ifi27isaprognosticmarkerforpancreaticcancerbasedoncomprehensivebioinformaticsanalysis
AT zuorongxia interferonalphainducibleprotein27ifi27isaprognosticmarkerforpancreaticcancerbasedoncomprehensivebioinformaticsanalysis
AT sayalian interferonalphainducibleprotein27ifi27isaprognosticmarkerforpancreaticcancerbasedoncomprehensivebioinformaticsanalysis
AT mazhihui interferonalphainducibleprotein27ifi27isaprognosticmarkerforpancreaticcancerbasedoncomprehensivebioinformaticsanalysis
AT ouyanghongmei interferonalphainducibleprotein27ifi27isaprognosticmarkerforpancreaticcancerbasedoncomprehensivebioinformaticsanalysis