Cargando…

Ferroptosis Activation Scoring Model Assists in Chemotherapeutic Agents’ Selection and Mediates Cross-Talk With Immunocytes in Malignant Glioblastoma

Gliomas are aggressive tumors in the central nervous system and glioblastoma is the most malignant type. Ferroptosis is a programmed cell death that can modulate tumor resistance to therapy and the components of tumor microenvironment. However, the relationship between ferroptosis, tumor immune land...

Descripción completa

Detalles Bibliográficos
Autores principales: Wang, Zeyu, Dai, Ziyu, Zheng, Lifu, Xu, Binyuan, Zhang, Hao, Fan, Fan, Zhang, Xun, Liang, Xisong, Liu, Zhixiong, Yang, Kui, Cheng, Quan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8807564/
https://www.ncbi.nlm.nih.gov/pubmed/35126346
http://dx.doi.org/10.3389/fimmu.2021.747408
_version_ 1784643707072413696
author Wang, Zeyu
Dai, Ziyu
Zheng, Lifu
Xu, Binyuan
Zhang, Hao
Fan, Fan
Zhang, Xun
Liang, Xisong
Liu, Zhixiong
Yang, Kui
Cheng, Quan
author_facet Wang, Zeyu
Dai, Ziyu
Zheng, Lifu
Xu, Binyuan
Zhang, Hao
Fan, Fan
Zhang, Xun
Liang, Xisong
Liu, Zhixiong
Yang, Kui
Cheng, Quan
author_sort Wang, Zeyu
collection PubMed
description Gliomas are aggressive tumors in the central nervous system and glioblastoma is the most malignant type. Ferroptosis is a programmed cell death that can modulate tumor resistance to therapy and the components of tumor microenvironment. However, the relationship between ferroptosis, tumor immune landscape, and glioblastoma progression is still elusive. In this work, data from bulk RNA-seq analysis, single cell RNA-seq analysis, and our own data (the Xiangya cohort) are integrated to reveal their relationships. A scoring system is constructed according to ferroptosis related gene expression, and high scoring samples resistant to ferroptosis and show worse survival outcome than low scoring samples. Notably, most of the high scoring samples are aggressive glioblastoma subtype, mesenchymal, and classical, by calculating RNA velocity. Cross-talk between high scoring glioblastoma cells and immunocytes are explored by R package ‘celltalker’. Ligand–receptor pairs like the TRAIL or TWEAK signaling pathway are identified as novel bridges implying how ferroptosis modulate immunocytes’ function and shape tumor microenvironment. Critically, potential drugs target to high scoring samples are predicted, namely, SNX2112, AZ628, and bortezomib and five compounds from the CellMiner database. Taken together, ferroptosis associates with glioblastoma aggressiveness, cross-talk with immunocytes and offer novel chemotherapy strategy.
format Online
Article
Text
id pubmed-8807564
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-88075642022-02-03 Ferroptosis Activation Scoring Model Assists in Chemotherapeutic Agents’ Selection and Mediates Cross-Talk With Immunocytes in Malignant Glioblastoma Wang, Zeyu Dai, Ziyu Zheng, Lifu Xu, Binyuan Zhang, Hao Fan, Fan Zhang, Xun Liang, Xisong Liu, Zhixiong Yang, Kui Cheng, Quan Front Immunol Immunology Gliomas are aggressive tumors in the central nervous system and glioblastoma is the most malignant type. Ferroptosis is a programmed cell death that can modulate tumor resistance to therapy and the components of tumor microenvironment. However, the relationship between ferroptosis, tumor immune landscape, and glioblastoma progression is still elusive. In this work, data from bulk RNA-seq analysis, single cell RNA-seq analysis, and our own data (the Xiangya cohort) are integrated to reveal their relationships. A scoring system is constructed according to ferroptosis related gene expression, and high scoring samples resistant to ferroptosis and show worse survival outcome than low scoring samples. Notably, most of the high scoring samples are aggressive glioblastoma subtype, mesenchymal, and classical, by calculating RNA velocity. Cross-talk between high scoring glioblastoma cells and immunocytes are explored by R package ‘celltalker’. Ligand–receptor pairs like the TRAIL or TWEAK signaling pathway are identified as novel bridges implying how ferroptosis modulate immunocytes’ function and shape tumor microenvironment. Critically, potential drugs target to high scoring samples are predicted, namely, SNX2112, AZ628, and bortezomib and five compounds from the CellMiner database. Taken together, ferroptosis associates with glioblastoma aggressiveness, cross-talk with immunocytes and offer novel chemotherapy strategy. Frontiers Media S.A. 2022-01-19 /pmc/articles/PMC8807564/ /pubmed/35126346 http://dx.doi.org/10.3389/fimmu.2021.747408 Text en Copyright © 2022 Wang, Dai, Zheng, Xu, Zhang, Fan, Zhang, Liang, Liu, Yang and Cheng https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Immunology
Wang, Zeyu
Dai, Ziyu
Zheng, Lifu
Xu, Binyuan
Zhang, Hao
Fan, Fan
Zhang, Xun
Liang, Xisong
Liu, Zhixiong
Yang, Kui
Cheng, Quan
Ferroptosis Activation Scoring Model Assists in Chemotherapeutic Agents’ Selection and Mediates Cross-Talk With Immunocytes in Malignant Glioblastoma
title Ferroptosis Activation Scoring Model Assists in Chemotherapeutic Agents’ Selection and Mediates Cross-Talk With Immunocytes in Malignant Glioblastoma
title_full Ferroptosis Activation Scoring Model Assists in Chemotherapeutic Agents’ Selection and Mediates Cross-Talk With Immunocytes in Malignant Glioblastoma
title_fullStr Ferroptosis Activation Scoring Model Assists in Chemotherapeutic Agents’ Selection and Mediates Cross-Talk With Immunocytes in Malignant Glioblastoma
title_full_unstemmed Ferroptosis Activation Scoring Model Assists in Chemotherapeutic Agents’ Selection and Mediates Cross-Talk With Immunocytes in Malignant Glioblastoma
title_short Ferroptosis Activation Scoring Model Assists in Chemotherapeutic Agents’ Selection and Mediates Cross-Talk With Immunocytes in Malignant Glioblastoma
title_sort ferroptosis activation scoring model assists in chemotherapeutic agents’ selection and mediates cross-talk with immunocytes in malignant glioblastoma
topic Immunology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8807564/
https://www.ncbi.nlm.nih.gov/pubmed/35126346
http://dx.doi.org/10.3389/fimmu.2021.747408
work_keys_str_mv AT wangzeyu ferroptosisactivationscoringmodelassistsinchemotherapeuticagentsselectionandmediatescrosstalkwithimmunocytesinmalignantglioblastoma
AT daiziyu ferroptosisactivationscoringmodelassistsinchemotherapeuticagentsselectionandmediatescrosstalkwithimmunocytesinmalignantglioblastoma
AT zhenglifu ferroptosisactivationscoringmodelassistsinchemotherapeuticagentsselectionandmediatescrosstalkwithimmunocytesinmalignantglioblastoma
AT xubinyuan ferroptosisactivationscoringmodelassistsinchemotherapeuticagentsselectionandmediatescrosstalkwithimmunocytesinmalignantglioblastoma
AT zhanghao ferroptosisactivationscoringmodelassistsinchemotherapeuticagentsselectionandmediatescrosstalkwithimmunocytesinmalignantglioblastoma
AT fanfan ferroptosisactivationscoringmodelassistsinchemotherapeuticagentsselectionandmediatescrosstalkwithimmunocytesinmalignantglioblastoma
AT zhangxun ferroptosisactivationscoringmodelassistsinchemotherapeuticagentsselectionandmediatescrosstalkwithimmunocytesinmalignantglioblastoma
AT liangxisong ferroptosisactivationscoringmodelassistsinchemotherapeuticagentsselectionandmediatescrosstalkwithimmunocytesinmalignantglioblastoma
AT liuzhixiong ferroptosisactivationscoringmodelassistsinchemotherapeuticagentsselectionandmediatescrosstalkwithimmunocytesinmalignantglioblastoma
AT yangkui ferroptosisactivationscoringmodelassistsinchemotherapeuticagentsselectionandmediatescrosstalkwithimmunocytesinmalignantglioblastoma
AT chengquan ferroptosisactivationscoringmodelassistsinchemotherapeuticagentsselectionandmediatescrosstalkwithimmunocytesinmalignantglioblastoma