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Bioinformatics Analysis of Prognostic Value of SPC24 in ccRCC and Pan-Cancer
PURPOSE: Clear cell renal cell carcinoma (ccRCC) is one of the most common diseases in the world, with high morbidity and mortality. Recent studies have revealed the important role of SPC24, a subunit of the Ndc80 complex, in the occurrence and development of carcinoma. However, the latent effect of...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Dove
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8807948/ https://www.ncbi.nlm.nih.gov/pubmed/35125884 http://dx.doi.org/10.2147/IJGM.S348859 |
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author | Zhang, Jipeng Chen, Xinlei Wang, Jirong Zhang, Pengfei Han, Xue Zhang, Youzhi Wang, Yonghua Yang, Xiaokun |
author_facet | Zhang, Jipeng Chen, Xinlei Wang, Jirong Zhang, Pengfei Han, Xue Zhang, Youzhi Wang, Yonghua Yang, Xiaokun |
author_sort | Zhang, Jipeng |
collection | PubMed |
description | PURPOSE: Clear cell renal cell carcinoma (ccRCC) is one of the most common diseases in the world, with high morbidity and mortality. Recent studies have revealed the important role of SPC24, a subunit of the Ndc80 complex, in the occurrence and development of carcinoma. However, the latent effect of SPC24 in the progress of ccRCC remains to be further explored. The intent of this research is to investigate whether SPC24 can be used as an index to predict the progression of ccRCC and to explore its relationship with the immune microenvironment and pan-cancer. MATERIALS AND METHODS: Based on data from public databases, we determined the expression level and clinical value of SPC24 in ccRCC and human pan-cancer. RT-qPCR analysis was carried out to detect the expression level of SPC24 in the OSRC/786O (human ccRCC cells) cell lines and HK2 (human normal kidney cells) cell line. The signal transduction pathways activated by different levels of SPC24 expression were explored by Gene Set Enrichment Analysis (GSEA), and the CIBERSORT algorithm was applied to analyze the relationship between infiltrating immune cells and SPC24 expression in ccRCC and pan-cancer tissues. RESULTS: SPC24 is overexpressed in ccRCC and several types of tumors, which is associated with poor prognosis. GSEA and CIBERSORT algorithms suggested that the high expression group of SPC24 enriched various pathways including immune-related pathways, and the several infiltrated immunocytes were related to the expression of SPC24. CONCLUSION: Our study revealed that SPC24 is a prognostic factor in ccRCC related to immunomodulation and has generalized value in pan-cancer. |
format | Online Article Text |
id | pubmed-8807948 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Dove |
record_format | MEDLINE/PubMed |
spelling | pubmed-88079482022-02-03 Bioinformatics Analysis of Prognostic Value of SPC24 in ccRCC and Pan-Cancer Zhang, Jipeng Chen, Xinlei Wang, Jirong Zhang, Pengfei Han, Xue Zhang, Youzhi Wang, Yonghua Yang, Xiaokun Int J Gen Med Original Research PURPOSE: Clear cell renal cell carcinoma (ccRCC) is one of the most common diseases in the world, with high morbidity and mortality. Recent studies have revealed the important role of SPC24, a subunit of the Ndc80 complex, in the occurrence and development of carcinoma. However, the latent effect of SPC24 in the progress of ccRCC remains to be further explored. The intent of this research is to investigate whether SPC24 can be used as an index to predict the progression of ccRCC and to explore its relationship with the immune microenvironment and pan-cancer. MATERIALS AND METHODS: Based on data from public databases, we determined the expression level and clinical value of SPC24 in ccRCC and human pan-cancer. RT-qPCR analysis was carried out to detect the expression level of SPC24 in the OSRC/786O (human ccRCC cells) cell lines and HK2 (human normal kidney cells) cell line. The signal transduction pathways activated by different levels of SPC24 expression were explored by Gene Set Enrichment Analysis (GSEA), and the CIBERSORT algorithm was applied to analyze the relationship between infiltrating immune cells and SPC24 expression in ccRCC and pan-cancer tissues. RESULTS: SPC24 is overexpressed in ccRCC and several types of tumors, which is associated with poor prognosis. GSEA and CIBERSORT algorithms suggested that the high expression group of SPC24 enriched various pathways including immune-related pathways, and the several infiltrated immunocytes were related to the expression of SPC24. CONCLUSION: Our study revealed that SPC24 is a prognostic factor in ccRCC related to immunomodulation and has generalized value in pan-cancer. Dove 2022-01-23 /pmc/articles/PMC8807948/ /pubmed/35125884 http://dx.doi.org/10.2147/IJGM.S348859 Text en © 2022 Zhang et al. https://creativecommons.org/licenses/by-nc/3.0/This work is published and licensed by Dove Medical Press Limited. The full terms of this license are available at https://www.dovepress.com/terms.php and incorporate the Creative Commons Attribution – Non Commercial (unported, v3.0) License (http://creativecommons.org/licenses/by-nc/3.0/ (https://creativecommons.org/licenses/by-nc/3.0/) ). By accessing the work you hereby accept the Terms. Non-commercial uses of the work are permitted without any further permission from Dove Medical Press Limited, provided the work is properly attributed. For permission for commercial use of this work, please see paragraphs 4.2 and 5 of our Terms (https://www.dovepress.com/terms.php). |
spellingShingle | Original Research Zhang, Jipeng Chen, Xinlei Wang, Jirong Zhang, Pengfei Han, Xue Zhang, Youzhi Wang, Yonghua Yang, Xiaokun Bioinformatics Analysis of Prognostic Value of SPC24 in ccRCC and Pan-Cancer |
title | Bioinformatics Analysis of Prognostic Value of SPC24 in ccRCC and Pan-Cancer |
title_full | Bioinformatics Analysis of Prognostic Value of SPC24 in ccRCC and Pan-Cancer |
title_fullStr | Bioinformatics Analysis of Prognostic Value of SPC24 in ccRCC and Pan-Cancer |
title_full_unstemmed | Bioinformatics Analysis of Prognostic Value of SPC24 in ccRCC and Pan-Cancer |
title_short | Bioinformatics Analysis of Prognostic Value of SPC24 in ccRCC and Pan-Cancer |
title_sort | bioinformatics analysis of prognostic value of spc24 in ccrcc and pan-cancer |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8807948/ https://www.ncbi.nlm.nih.gov/pubmed/35125884 http://dx.doi.org/10.2147/IJGM.S348859 |
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