Cargando…
Expression, prognosis value, and immune infiltration of lncRNA ASB16-AS1 identified by pan-cancer analysis
Long non-coding RNA known as ASB16 antisense RNA1 (ASB16-AS1) has been proven to be an oncogene, and the relationship between ASB16-AS1 and immunity is still under studied. This study aims to explore the expression and prognostic potential of ASB16-AS1, and to visualize the relationship between ASB1...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8810074/ https://www.ncbi.nlm.nih.gov/pubmed/34709970 http://dx.doi.org/10.1080/21655979.2021.1996054 |
_version_ | 1784644166611894272 |
---|---|
author | Wu, Linyong Liao, Wei Wang, Xiaodong Zhao, Yujia Pang, Jinshu Chen, Yuji Yang, Hong He, Yun |
author_facet | Wu, Linyong Liao, Wei Wang, Xiaodong Zhao, Yujia Pang, Jinshu Chen, Yuji Yang, Hong He, Yun |
author_sort | Wu, Linyong |
collection | PubMed |
description | Long non-coding RNA known as ASB16 antisense RNA1 (ASB16-AS1) has been proven to be an oncogene, and the relationship between ASB16-AS1 and immunity is still under studied. This study aims to explore the expression and prognostic potential of ASB16-AS1, and to visualize the relationship between ASB16-AS1 expression and immune infiltration in pan-cancer analysis. We clarified ASB16-AS1 expression patterns and its relationship with prognosis through multi-platform and multi-database sources. We also verified the function of ASB16-AS1 in liver hepatocellular carcinoma (LIHC). A variety of immune cell content evaluation methods were used to mutually verify the correlation between ASB16-AS1 and immune infiltration. Finally, the relationships between ASB16-AS1 and molecular characteristics were further explored. In terms of comprehensive analysis, compared with non-tumor tissues, ASB16-AS1 was highly expressed in tumor tissues, and indicated the value of poor prognosis in multiple cancer types. Functional assays, such as counting kit-8 assay, transwell assay and scratch-wound assay verified that high ASB16-AS1 expression promoted tumor progression in LIHC. ASB16-AS1 was positively correlated with B cells, T cells CD4+ and T cells CD8+ in most cancer types, and negatively correlated with macrophages, dendritic cells and neutrophils in some cancer types. In addition, there were different interaction modes between ASB16-AS1 and molecular features, such as the relationship with oncogenic signaling pathways, showing that the high ASB16-AS1 expression was related to alterations in oncogenic signaling pathways. Our study emphasizes that ASB16-AS1 is a potential pan-cancer prognostic marker, whichs is associated with the immune infiltration in multiple cancer types. |
format | Online Article Text |
id | pubmed-8810074 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-88100742022-02-03 Expression, prognosis value, and immune infiltration of lncRNA ASB16-AS1 identified by pan-cancer analysis Wu, Linyong Liao, Wei Wang, Xiaodong Zhao, Yujia Pang, Jinshu Chen, Yuji Yang, Hong He, Yun Bioengineered Research Paper Long non-coding RNA known as ASB16 antisense RNA1 (ASB16-AS1) has been proven to be an oncogene, and the relationship between ASB16-AS1 and immunity is still under studied. This study aims to explore the expression and prognostic potential of ASB16-AS1, and to visualize the relationship between ASB16-AS1 expression and immune infiltration in pan-cancer analysis. We clarified ASB16-AS1 expression patterns and its relationship with prognosis through multi-platform and multi-database sources. We also verified the function of ASB16-AS1 in liver hepatocellular carcinoma (LIHC). A variety of immune cell content evaluation methods were used to mutually verify the correlation between ASB16-AS1 and immune infiltration. Finally, the relationships between ASB16-AS1 and molecular characteristics were further explored. In terms of comprehensive analysis, compared with non-tumor tissues, ASB16-AS1 was highly expressed in tumor tissues, and indicated the value of poor prognosis in multiple cancer types. Functional assays, such as counting kit-8 assay, transwell assay and scratch-wound assay verified that high ASB16-AS1 expression promoted tumor progression in LIHC. ASB16-AS1 was positively correlated with B cells, T cells CD4+ and T cells CD8+ in most cancer types, and negatively correlated with macrophages, dendritic cells and neutrophils in some cancer types. In addition, there were different interaction modes between ASB16-AS1 and molecular features, such as the relationship with oncogenic signaling pathways, showing that the high ASB16-AS1 expression was related to alterations in oncogenic signaling pathways. Our study emphasizes that ASB16-AS1 is a potential pan-cancer prognostic marker, whichs is associated with the immune infiltration in multiple cancer types. Taylor & Francis 2021-12-23 /pmc/articles/PMC8810074/ /pubmed/34709970 http://dx.doi.org/10.1080/21655979.2021.1996054 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Paper Wu, Linyong Liao, Wei Wang, Xiaodong Zhao, Yujia Pang, Jinshu Chen, Yuji Yang, Hong He, Yun Expression, prognosis value, and immune infiltration of lncRNA ASB16-AS1 identified by pan-cancer analysis |
title | Expression, prognosis value, and immune infiltration of lncRNA ASB16-AS1 identified by pan-cancer analysis |
title_full | Expression, prognosis value, and immune infiltration of lncRNA ASB16-AS1 identified by pan-cancer analysis |
title_fullStr | Expression, prognosis value, and immune infiltration of lncRNA ASB16-AS1 identified by pan-cancer analysis |
title_full_unstemmed | Expression, prognosis value, and immune infiltration of lncRNA ASB16-AS1 identified by pan-cancer analysis |
title_short | Expression, prognosis value, and immune infiltration of lncRNA ASB16-AS1 identified by pan-cancer analysis |
title_sort | expression, prognosis value, and immune infiltration of lncrna asb16-as1 identified by pan-cancer analysis |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8810074/ https://www.ncbi.nlm.nih.gov/pubmed/34709970 http://dx.doi.org/10.1080/21655979.2021.1996054 |
work_keys_str_mv | AT wulinyong expressionprognosisvalueandimmuneinfiltrationoflncrnaasb16as1identifiedbypancanceranalysis AT liaowei expressionprognosisvalueandimmuneinfiltrationoflncrnaasb16as1identifiedbypancanceranalysis AT wangxiaodong expressionprognosisvalueandimmuneinfiltrationoflncrnaasb16as1identifiedbypancanceranalysis AT zhaoyujia expressionprognosisvalueandimmuneinfiltrationoflncrnaasb16as1identifiedbypancanceranalysis AT pangjinshu expressionprognosisvalueandimmuneinfiltrationoflncrnaasb16as1identifiedbypancanceranalysis AT chenyuji expressionprognosisvalueandimmuneinfiltrationoflncrnaasb16as1identifiedbypancanceranalysis AT yanghong expressionprognosisvalueandimmuneinfiltrationoflncrnaasb16as1identifiedbypancanceranalysis AT heyun expressionprognosisvalueandimmuneinfiltrationoflncrnaasb16as1identifiedbypancanceranalysis |