Cargando…

Microenvironment-associated gene HSD11B1 may serve as a prognostic biomarker in clear cell renal cell carcinoma: a study based on TCGA, RT‑qPCR, Western blotting, and immunohistochemistry

Clear cell renal cell carcinoma (ccRCC) is one of the most common malignant tumors worldwide. The clinical treatment of ccRCC is strongly associated with the tumor microenvironment (TME). Identifying potential markers of ccRCC is important to improve prognosis. Therefore, in the present study, the l...

Descripción completa

Detalles Bibliográficos
Autores principales: Han, Di, Yu, Zhongjie, Zhang, Hong, Liu, Haipeng, Wang, Bin, Qian, Donmeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8810109/
https://www.ncbi.nlm.nih.gov/pubmed/34845968
http://dx.doi.org/10.1080/21655979.2021.1994908
_version_ 1784644178737627136
author Han, Di
Yu, Zhongjie
Zhang, Hong
Liu, Haipeng
Wang, Bin
Qian, Donmeng
author_facet Han, Di
Yu, Zhongjie
Zhang, Hong
Liu, Haipeng
Wang, Bin
Qian, Donmeng
author_sort Han, Di
collection PubMed
description Clear cell renal cell carcinoma (ccRCC) is one of the most common malignant tumors worldwide. The clinical treatment of ccRCC is strongly associated with the tumor microenvironment (TME). Identifying potential markers of ccRCC is important to improve prognosis. Therefore, in the present study, the levels of immune/stromal components and the proportion of tumor-infiltrating immune cells (TIICs) were determined in 611 ccRCC samples using the ESTIMATE and CIBERSORT analytical tools. Subsequently, hydroxysteroid 11-beta dehydrogenase-1 (HSD11B1) was identified by univariate Cox regression analysis, protein-protein interaction (PPI) networks and clinical survival analysis to be associated with ccRCC prognosis. At the same time, the abundance of HSD11B1 increased significantly in ccRCC was verified by western blotting, RT‑qPCR and immunostaining analysis. Furthermore, Gene Set Enrichment Analysis (GSEA) and TME suggested that HSD11B1 was involved in TME immune-related status. Taken together, the results of the present study demonstrated that HSD11B1 is a potential prognostic biomarker associated with immune cell infiltration in ccRCC.
format Online
Article
Text
id pubmed-8810109
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-88101092022-02-03 Microenvironment-associated gene HSD11B1 may serve as a prognostic biomarker in clear cell renal cell carcinoma: a study based on TCGA, RT‑qPCR, Western blotting, and immunohistochemistry Han, Di Yu, Zhongjie Zhang, Hong Liu, Haipeng Wang, Bin Qian, Donmeng Bioengineered Research Paper Clear cell renal cell carcinoma (ccRCC) is one of the most common malignant tumors worldwide. The clinical treatment of ccRCC is strongly associated with the tumor microenvironment (TME). Identifying potential markers of ccRCC is important to improve prognosis. Therefore, in the present study, the levels of immune/stromal components and the proportion of tumor-infiltrating immune cells (TIICs) were determined in 611 ccRCC samples using the ESTIMATE and CIBERSORT analytical tools. Subsequently, hydroxysteroid 11-beta dehydrogenase-1 (HSD11B1) was identified by univariate Cox regression analysis, protein-protein interaction (PPI) networks and clinical survival analysis to be associated with ccRCC prognosis. At the same time, the abundance of HSD11B1 increased significantly in ccRCC was verified by western blotting, RT‑qPCR and immunostaining analysis. Furthermore, Gene Set Enrichment Analysis (GSEA) and TME suggested that HSD11B1 was involved in TME immune-related status. Taken together, the results of the present study demonstrated that HSD11B1 is a potential prognostic biomarker associated with immune cell infiltration in ccRCC. Taylor & Francis 2021-11-30 /pmc/articles/PMC8810109/ /pubmed/34845968 http://dx.doi.org/10.1080/21655979.2021.1994908 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Paper
Han, Di
Yu, Zhongjie
Zhang, Hong
Liu, Haipeng
Wang, Bin
Qian, Donmeng
Microenvironment-associated gene HSD11B1 may serve as a prognostic biomarker in clear cell renal cell carcinoma: a study based on TCGA, RT‑qPCR, Western blotting, and immunohistochemistry
title Microenvironment-associated gene HSD11B1 may serve as a prognostic biomarker in clear cell renal cell carcinoma: a study based on TCGA, RT‑qPCR, Western blotting, and immunohistochemistry
title_full Microenvironment-associated gene HSD11B1 may serve as a prognostic biomarker in clear cell renal cell carcinoma: a study based on TCGA, RT‑qPCR, Western blotting, and immunohistochemistry
title_fullStr Microenvironment-associated gene HSD11B1 may serve as a prognostic biomarker in clear cell renal cell carcinoma: a study based on TCGA, RT‑qPCR, Western blotting, and immunohistochemistry
title_full_unstemmed Microenvironment-associated gene HSD11B1 may serve as a prognostic biomarker in clear cell renal cell carcinoma: a study based on TCGA, RT‑qPCR, Western blotting, and immunohistochemistry
title_short Microenvironment-associated gene HSD11B1 may serve as a prognostic biomarker in clear cell renal cell carcinoma: a study based on TCGA, RT‑qPCR, Western blotting, and immunohistochemistry
title_sort microenvironment-associated gene hsd11b1 may serve as a prognostic biomarker in clear cell renal cell carcinoma: a study based on tcga, rt‑qpcr, western blotting, and immunohistochemistry
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8810109/
https://www.ncbi.nlm.nih.gov/pubmed/34845968
http://dx.doi.org/10.1080/21655979.2021.1994908
work_keys_str_mv AT handi microenvironmentassociatedgenehsd11b1mayserveasaprognosticbiomarkerinclearcellrenalcellcarcinomaastudybasedontcgartqpcrwesternblottingandimmunohistochemistry
AT yuzhongjie microenvironmentassociatedgenehsd11b1mayserveasaprognosticbiomarkerinclearcellrenalcellcarcinomaastudybasedontcgartqpcrwesternblottingandimmunohistochemistry
AT zhanghong microenvironmentassociatedgenehsd11b1mayserveasaprognosticbiomarkerinclearcellrenalcellcarcinomaastudybasedontcgartqpcrwesternblottingandimmunohistochemistry
AT liuhaipeng microenvironmentassociatedgenehsd11b1mayserveasaprognosticbiomarkerinclearcellrenalcellcarcinomaastudybasedontcgartqpcrwesternblottingandimmunohistochemistry
AT wangbin microenvironmentassociatedgenehsd11b1mayserveasaprognosticbiomarkerinclearcellrenalcellcarcinomaastudybasedontcgartqpcrwesternblottingandimmunohistochemistry
AT qiandonmeng microenvironmentassociatedgenehsd11b1mayserveasaprognosticbiomarkerinclearcellrenalcellcarcinomaastudybasedontcgartqpcrwesternblottingandimmunohistochemistry