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Circular RNA expression alteration and bioinformatics analysis in patients with acute cerebral infarction injury

In recent years, a steady increase has been detected in the incidence of acute cerebral infarction (ACI). ACI is caused by blood flow disruption, leading to high disability and mortality rates. Understanding the underlying molecular mechanisms is critical toward developing effective therapeutic appr...

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Autores principales: Hu, Xiao-Lei, Su, Qian, Meng, de-Long, Ren, Yuan-Shui, Su, Zhi-Qiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8810197/
https://www.ncbi.nlm.nih.gov/pubmed/34873976
http://dx.doi.org/10.1080/21655979.2021.2009960
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author Hu, Xiao-Lei
Su, Qian
Meng, de-Long
Ren, Yuan-Shui
Su, Zhi-Qiang
author_facet Hu, Xiao-Lei
Su, Qian
Meng, de-Long
Ren, Yuan-Shui
Su, Zhi-Qiang
author_sort Hu, Xiao-Lei
collection PubMed
description In recent years, a steady increase has been detected in the incidence of acute cerebral infarction (ACI). ACI is caused by blood flow disruption, leading to high disability and mortality rates. Understanding the underlying molecular mechanisms is critical toward developing effective therapeutic approaches. Circular RNAs (circRNAs) are an important class of non-coding RNAs, which have been implicated in several molecular pathways, and their dysregulation has been described in several disease conditions. Here, we set out to explore the possible regulatory role of circRNAs in ischemic stroke and study their molecular function in disease. First, we applied high-throughput sequencing techniques to identify the differential changes of plasma circRNAs expression in patients with acute cerebral infarction. Next, we used GO and KEGG pathway analysis to predict the function of differentially expressed circRNAs. Moreover, we have assessed the possible interaction between the identified differentially expressed circRNAs and miRNAs. Finally, we have selected and validated five downregulated circRNAs by RT-qPCR. Together, the results of this study provide evidence that circRNAs are potential biomarkers for early diagnosis of cerebral infarction and have to be considered as targets for drug treatment.
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spelling pubmed-88101972022-02-03 Circular RNA expression alteration and bioinformatics analysis in patients with acute cerebral infarction injury Hu, Xiao-Lei Su, Qian Meng, de-Long Ren, Yuan-Shui Su, Zhi-Qiang Bioengineered Research Paper In recent years, a steady increase has been detected in the incidence of acute cerebral infarction (ACI). ACI is caused by blood flow disruption, leading to high disability and mortality rates. Understanding the underlying molecular mechanisms is critical toward developing effective therapeutic approaches. Circular RNAs (circRNAs) are an important class of non-coding RNAs, which have been implicated in several molecular pathways, and their dysregulation has been described in several disease conditions. Here, we set out to explore the possible regulatory role of circRNAs in ischemic stroke and study their molecular function in disease. First, we applied high-throughput sequencing techniques to identify the differential changes of plasma circRNAs expression in patients with acute cerebral infarction. Next, we used GO and KEGG pathway analysis to predict the function of differentially expressed circRNAs. Moreover, we have assessed the possible interaction between the identified differentially expressed circRNAs and miRNAs. Finally, we have selected and validated five downregulated circRNAs by RT-qPCR. Together, the results of this study provide evidence that circRNAs are potential biomarkers for early diagnosis of cerebral infarction and have to be considered as targets for drug treatment. Taylor & Francis 2021-12-07 /pmc/articles/PMC8810197/ /pubmed/34873976 http://dx.doi.org/10.1080/21655979.2021.2009960 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Paper
Hu, Xiao-Lei
Su, Qian
Meng, de-Long
Ren, Yuan-Shui
Su, Zhi-Qiang
Circular RNA expression alteration and bioinformatics analysis in patients with acute cerebral infarction injury
title Circular RNA expression alteration and bioinformatics analysis in patients with acute cerebral infarction injury
title_full Circular RNA expression alteration and bioinformatics analysis in patients with acute cerebral infarction injury
title_fullStr Circular RNA expression alteration and bioinformatics analysis in patients with acute cerebral infarction injury
title_full_unstemmed Circular RNA expression alteration and bioinformatics analysis in patients with acute cerebral infarction injury
title_short Circular RNA expression alteration and bioinformatics analysis in patients with acute cerebral infarction injury
title_sort circular rna expression alteration and bioinformatics analysis in patients with acute cerebral infarction injury
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8810197/
https://www.ncbi.nlm.nih.gov/pubmed/34873976
http://dx.doi.org/10.1080/21655979.2021.2009960
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