Cargando…
Circular RNA expression alteration and bioinformatics analysis in patients with acute cerebral infarction injury
In recent years, a steady increase has been detected in the incidence of acute cerebral infarction (ACI). ACI is caused by blood flow disruption, leading to high disability and mortality rates. Understanding the underlying molecular mechanisms is critical toward developing effective therapeutic appr...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8810197/ https://www.ncbi.nlm.nih.gov/pubmed/34873976 http://dx.doi.org/10.1080/21655979.2021.2009960 |
_version_ | 1784644200599388160 |
---|---|
author | Hu, Xiao-Lei Su, Qian Meng, de-Long Ren, Yuan-Shui Su, Zhi-Qiang |
author_facet | Hu, Xiao-Lei Su, Qian Meng, de-Long Ren, Yuan-Shui Su, Zhi-Qiang |
author_sort | Hu, Xiao-Lei |
collection | PubMed |
description | In recent years, a steady increase has been detected in the incidence of acute cerebral infarction (ACI). ACI is caused by blood flow disruption, leading to high disability and mortality rates. Understanding the underlying molecular mechanisms is critical toward developing effective therapeutic approaches. Circular RNAs (circRNAs) are an important class of non-coding RNAs, which have been implicated in several molecular pathways, and their dysregulation has been described in several disease conditions. Here, we set out to explore the possible regulatory role of circRNAs in ischemic stroke and study their molecular function in disease. First, we applied high-throughput sequencing techniques to identify the differential changes of plasma circRNAs expression in patients with acute cerebral infarction. Next, we used GO and KEGG pathway analysis to predict the function of differentially expressed circRNAs. Moreover, we have assessed the possible interaction between the identified differentially expressed circRNAs and miRNAs. Finally, we have selected and validated five downregulated circRNAs by RT-qPCR. Together, the results of this study provide evidence that circRNAs are potential biomarkers for early diagnosis of cerebral infarction and have to be considered as targets for drug treatment. |
format | Online Article Text |
id | pubmed-8810197 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-88101972022-02-03 Circular RNA expression alteration and bioinformatics analysis in patients with acute cerebral infarction injury Hu, Xiao-Lei Su, Qian Meng, de-Long Ren, Yuan-Shui Su, Zhi-Qiang Bioengineered Research Paper In recent years, a steady increase has been detected in the incidence of acute cerebral infarction (ACI). ACI is caused by blood flow disruption, leading to high disability and mortality rates. Understanding the underlying molecular mechanisms is critical toward developing effective therapeutic approaches. Circular RNAs (circRNAs) are an important class of non-coding RNAs, which have been implicated in several molecular pathways, and their dysregulation has been described in several disease conditions. Here, we set out to explore the possible regulatory role of circRNAs in ischemic stroke and study their molecular function in disease. First, we applied high-throughput sequencing techniques to identify the differential changes of plasma circRNAs expression in patients with acute cerebral infarction. Next, we used GO and KEGG pathway analysis to predict the function of differentially expressed circRNAs. Moreover, we have assessed the possible interaction between the identified differentially expressed circRNAs and miRNAs. Finally, we have selected and validated five downregulated circRNAs by RT-qPCR. Together, the results of this study provide evidence that circRNAs are potential biomarkers for early diagnosis of cerebral infarction and have to be considered as targets for drug treatment. Taylor & Francis 2021-12-07 /pmc/articles/PMC8810197/ /pubmed/34873976 http://dx.doi.org/10.1080/21655979.2021.2009960 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Paper Hu, Xiao-Lei Su, Qian Meng, de-Long Ren, Yuan-Shui Su, Zhi-Qiang Circular RNA expression alteration and bioinformatics analysis in patients with acute cerebral infarction injury |
title | Circular RNA expression alteration and bioinformatics analysis in patients with acute cerebral infarction injury |
title_full | Circular RNA expression alteration and bioinformatics analysis in patients with acute cerebral infarction injury |
title_fullStr | Circular RNA expression alteration and bioinformatics analysis in patients with acute cerebral infarction injury |
title_full_unstemmed | Circular RNA expression alteration and bioinformatics analysis in patients with acute cerebral infarction injury |
title_short | Circular RNA expression alteration and bioinformatics analysis in patients with acute cerebral infarction injury |
title_sort | circular rna expression alteration and bioinformatics analysis in patients with acute cerebral infarction injury |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8810197/ https://www.ncbi.nlm.nih.gov/pubmed/34873976 http://dx.doi.org/10.1080/21655979.2021.2009960 |
work_keys_str_mv | AT huxiaolei circularrnaexpressionalterationandbioinformaticsanalysisinpatientswithacutecerebralinfarctioninjury AT suqian circularrnaexpressionalterationandbioinformaticsanalysisinpatientswithacutecerebralinfarctioninjury AT mengdelong circularrnaexpressionalterationandbioinformaticsanalysisinpatientswithacutecerebralinfarctioninjury AT renyuanshui circularrnaexpressionalterationandbioinformaticsanalysisinpatientswithacutecerebralinfarctioninjury AT suzhiqiang circularrnaexpressionalterationandbioinformaticsanalysisinpatientswithacutecerebralinfarctioninjury |