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A reusable neural network pipeline for unidirectional fiber segmentation
Fiber-reinforced ceramic-matrix composites are advanced, temperature resistant materials with applications in aerospace engineering. Their analysis involves the detection and separation of fibers, embedded in a fiber bed, from an imaged sample. Currently, this is mostly done using semi-supervised te...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8810976/ https://www.ncbi.nlm.nih.gov/pubmed/35110550 http://dx.doi.org/10.1038/s41597-022-01119-6 |
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author | Fioravante de Siqueira, Alexandre Ushizima, Daniela M. van der Walt, Stéfan J. |
author_facet | Fioravante de Siqueira, Alexandre Ushizima, Daniela M. van der Walt, Stéfan J. |
author_sort | Fioravante de Siqueira, Alexandre |
collection | PubMed |
description | Fiber-reinforced ceramic-matrix composites are advanced, temperature resistant materials with applications in aerospace engineering. Their analysis involves the detection and separation of fibers, embedded in a fiber bed, from an imaged sample. Currently, this is mostly done using semi-supervised techniques. Here, we present an open, automated computational pipeline to detect fibers from a tomographically reconstructed X-ray volume. We apply our pipeline to a non-trivial dataset by Larson et al. To separate the fibers in these samples, we tested four different architectures of convolutional neural networks. When comparing our neural network approach to a semi-supervised one, we obtained Dice and Matthews coefficients reaching up to 98%, showing that these automated approaches can match human-supervised methods, in some cases separating fibers that human-curated algorithms could not find. The software written for this project is open source, released under a permissive license, and can be freely adapted and re-used in other domains. |
format | Online Article Text |
id | pubmed-8810976 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-88109762022-02-10 A reusable neural network pipeline for unidirectional fiber segmentation Fioravante de Siqueira, Alexandre Ushizima, Daniela M. van der Walt, Stéfan J. Sci Data Analysis Fiber-reinforced ceramic-matrix composites are advanced, temperature resistant materials with applications in aerospace engineering. Their analysis involves the detection and separation of fibers, embedded in a fiber bed, from an imaged sample. Currently, this is mostly done using semi-supervised techniques. Here, we present an open, automated computational pipeline to detect fibers from a tomographically reconstructed X-ray volume. We apply our pipeline to a non-trivial dataset by Larson et al. To separate the fibers in these samples, we tested four different architectures of convolutional neural networks. When comparing our neural network approach to a semi-supervised one, we obtained Dice and Matthews coefficients reaching up to 98%, showing that these automated approaches can match human-supervised methods, in some cases separating fibers that human-curated algorithms could not find. The software written for this project is open source, released under a permissive license, and can be freely adapted and re-used in other domains. Nature Publishing Group UK 2022-02-02 /pmc/articles/PMC8810976/ /pubmed/35110550 http://dx.doi.org/10.1038/s41597-022-01119-6 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Analysis Fioravante de Siqueira, Alexandre Ushizima, Daniela M. van der Walt, Stéfan J. A reusable neural network pipeline for unidirectional fiber segmentation |
title | A reusable neural network pipeline for unidirectional fiber segmentation |
title_full | A reusable neural network pipeline for unidirectional fiber segmentation |
title_fullStr | A reusable neural network pipeline for unidirectional fiber segmentation |
title_full_unstemmed | A reusable neural network pipeline for unidirectional fiber segmentation |
title_short | A reusable neural network pipeline for unidirectional fiber segmentation |
title_sort | reusable neural network pipeline for unidirectional fiber segmentation |
topic | Analysis |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8810976/ https://www.ncbi.nlm.nih.gov/pubmed/35110550 http://dx.doi.org/10.1038/s41597-022-01119-6 |
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