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Cloning and Functional Characterization of a Pericarp Abundant Expression Promoter (AhGLP17-1P) From Peanut (Arachis hypogaea L.)

Peanut (Arachis hypogaea L.) is an important oil and food legume crop grown in tropical and subtropical areas of the world. As a geocarpic crop, it is affected by many soil-borne diseases and pathogens. The pericarp, an inedible part of the seed, acts as the first layer of defense against biotic and...

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Autores principales: Sharif, Yasir, Chen, Hua, Deng, Ye, Ali, Niaz, Khan, Shahid Ali, Zhang, Chong, Xie, Wenping, Chen, Kun, Cai, Tiecheng, Yang, Qiang, Zhuang, Yuhui, Raza, Ali, Zhuang, Weijian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8811503/
https://www.ncbi.nlm.nih.gov/pubmed/35126474
http://dx.doi.org/10.3389/fgene.2021.821281
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author Sharif, Yasir
Chen, Hua
Deng, Ye
Ali, Niaz
Khan, Shahid Ali
Zhang, Chong
Xie, Wenping
Chen, Kun
Cai, Tiecheng
Yang, Qiang
Zhuang, Yuhui
Raza, Ali
Zhuang, Weijian
author_facet Sharif, Yasir
Chen, Hua
Deng, Ye
Ali, Niaz
Khan, Shahid Ali
Zhang, Chong
Xie, Wenping
Chen, Kun
Cai, Tiecheng
Yang, Qiang
Zhuang, Yuhui
Raza, Ali
Zhuang, Weijian
author_sort Sharif, Yasir
collection PubMed
description Peanut (Arachis hypogaea L.) is an important oil and food legume crop grown in tropical and subtropical areas of the world. As a geocarpic crop, it is affected by many soil-borne diseases and pathogens. The pericarp, an inedible part of the seed, acts as the first layer of defense against biotic and abiotic stresses. Pericarp promoters could drive the defense-related genes specific expression in pericarp for the defense application. Here, we identified a pericarp-abundant promoter (AhGLP17-1P) through microarray and transcriptome analysis. Besides the core promoter elements, several other important cis-elements were identified using online promoter analysis tools. Semiquantitative and qRT-PCR analyses validated that the AhGLP17-1 gene was specifically expressed only in the pericarp, and no expression was detected in leaves, stem, roots, flowers, gynophore/peg, testa, and embryo in peanut. Transgenic Arabidopsis plants showed strong GUS expression in siliques, while GUS staining was almost absent in remaining tissues, including roots, seedlings, leaf, stem, flowers, cotyledons, embryo, and seed coat confirmed its peanut expressions. Quantitative expression of the GUS gene also supported the GUS staining results. The results strongly suggest that this promoter can drive foreign genes’ expression in a pericarp-abundant manner. This is the first study on the functional characterization of the pericarp-abundant promoters in peanut. The results could provide practical significance to improve the resistance of peanut, and other crops for seed protection uses.
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spelling pubmed-88115032022-02-04 Cloning and Functional Characterization of a Pericarp Abundant Expression Promoter (AhGLP17-1P) From Peanut (Arachis hypogaea L.) Sharif, Yasir Chen, Hua Deng, Ye Ali, Niaz Khan, Shahid Ali Zhang, Chong Xie, Wenping Chen, Kun Cai, Tiecheng Yang, Qiang Zhuang, Yuhui Raza, Ali Zhuang, Weijian Front Genet Genetics Peanut (Arachis hypogaea L.) is an important oil and food legume crop grown in tropical and subtropical areas of the world. As a geocarpic crop, it is affected by many soil-borne diseases and pathogens. The pericarp, an inedible part of the seed, acts as the first layer of defense against biotic and abiotic stresses. Pericarp promoters could drive the defense-related genes specific expression in pericarp for the defense application. Here, we identified a pericarp-abundant promoter (AhGLP17-1P) through microarray and transcriptome analysis. Besides the core promoter elements, several other important cis-elements were identified using online promoter analysis tools. Semiquantitative and qRT-PCR analyses validated that the AhGLP17-1 gene was specifically expressed only in the pericarp, and no expression was detected in leaves, stem, roots, flowers, gynophore/peg, testa, and embryo in peanut. Transgenic Arabidopsis plants showed strong GUS expression in siliques, while GUS staining was almost absent in remaining tissues, including roots, seedlings, leaf, stem, flowers, cotyledons, embryo, and seed coat confirmed its peanut expressions. Quantitative expression of the GUS gene also supported the GUS staining results. The results strongly suggest that this promoter can drive foreign genes’ expression in a pericarp-abundant manner. This is the first study on the functional characterization of the pericarp-abundant promoters in peanut. The results could provide practical significance to improve the resistance of peanut, and other crops for seed protection uses. Frontiers Media S.A. 2022-01-20 /pmc/articles/PMC8811503/ /pubmed/35126474 http://dx.doi.org/10.3389/fgene.2021.821281 Text en Copyright © 2022 Sharif, Chen, Deng, Ali, Khan, Zhang, Xie, Chen, Cai, Yang, Zhuang, Raza and Zhuang. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Sharif, Yasir
Chen, Hua
Deng, Ye
Ali, Niaz
Khan, Shahid Ali
Zhang, Chong
Xie, Wenping
Chen, Kun
Cai, Tiecheng
Yang, Qiang
Zhuang, Yuhui
Raza, Ali
Zhuang, Weijian
Cloning and Functional Characterization of a Pericarp Abundant Expression Promoter (AhGLP17-1P) From Peanut (Arachis hypogaea L.)
title Cloning and Functional Characterization of a Pericarp Abundant Expression Promoter (AhGLP17-1P) From Peanut (Arachis hypogaea L.)
title_full Cloning and Functional Characterization of a Pericarp Abundant Expression Promoter (AhGLP17-1P) From Peanut (Arachis hypogaea L.)
title_fullStr Cloning and Functional Characterization of a Pericarp Abundant Expression Promoter (AhGLP17-1P) From Peanut (Arachis hypogaea L.)
title_full_unstemmed Cloning and Functional Characterization of a Pericarp Abundant Expression Promoter (AhGLP17-1P) From Peanut (Arachis hypogaea L.)
title_short Cloning and Functional Characterization of a Pericarp Abundant Expression Promoter (AhGLP17-1P) From Peanut (Arachis hypogaea L.)
title_sort cloning and functional characterization of a pericarp abundant expression promoter (ahglp17-1p) from peanut (arachis hypogaea l.)
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8811503/
https://www.ncbi.nlm.nih.gov/pubmed/35126474
http://dx.doi.org/10.3389/fgene.2021.821281
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