Draft Hybrid Genome Assembly of a Canadian Cyclospora cayetanensis Isolate

The apicomplexan parasite Cyclospora cayetanensis causes foodborne gastrointestinal disease in humans. Here, we report the first hybrid assembly for C. cayetanensis, which uses both Illumina MiSeq and Oxford Nanopore Technologies MinION platforms to generate genomic sequence data. The final genome a...

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Detalles Bibliográficos
Autores principales: Yanta, Christine A., Pollo, Stephen M. J., Barta, John R., Reiling, Sarah J., Wasmuth, James D., Dixon, Brent R., Guy, Rebecca A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2022
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8812300/
https://www.ncbi.nlm.nih.gov/pubmed/35112896
http://dx.doi.org/10.1128/mra.01072-21
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author Yanta, Christine A.
Pollo, Stephen M. J.
Barta, John R.
Reiling, Sarah J.
Wasmuth, James D.
Dixon, Brent R.
Guy, Rebecca A.
author_facet Yanta, Christine A.
Pollo, Stephen M. J.
Barta, John R.
Reiling, Sarah J.
Wasmuth, James D.
Dixon, Brent R.
Guy, Rebecca A.
author_sort Yanta, Christine A.
collection PubMed
description The apicomplexan parasite Cyclospora cayetanensis causes foodborne gastrointestinal disease in humans. Here, we report the first hybrid assembly for C. cayetanensis, which uses both Illumina MiSeq and Oxford Nanopore Technologies MinION platforms to generate genomic sequence data. The final genome assembly consists of 44,586,677 bases represented in 313 contigs.
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spelling pubmed-88123002022-02-09 Draft Hybrid Genome Assembly of a Canadian Cyclospora cayetanensis Isolate Yanta, Christine A. Pollo, Stephen M. J. Barta, John R. Reiling, Sarah J. Wasmuth, James D. Dixon, Brent R. Guy, Rebecca A. Microbiol Resour Announc Genome Sequences The apicomplexan parasite Cyclospora cayetanensis causes foodborne gastrointestinal disease in humans. Here, we report the first hybrid assembly for C. cayetanensis, which uses both Illumina MiSeq and Oxford Nanopore Technologies MinION platforms to generate genomic sequence data. The final genome assembly consists of 44,586,677 bases represented in 313 contigs. American Society for Microbiology 2022-02-03 /pmc/articles/PMC8812300/ /pubmed/35112896 http://dx.doi.org/10.1128/mra.01072-21 Text en Copyright © 2022 Crown. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Genome Sequences
Yanta, Christine A.
Pollo, Stephen M. J.
Barta, John R.
Reiling, Sarah J.
Wasmuth, James D.
Dixon, Brent R.
Guy, Rebecca A.
Draft Hybrid Genome Assembly of a Canadian Cyclospora cayetanensis Isolate
title Draft Hybrid Genome Assembly of a Canadian Cyclospora cayetanensis Isolate
title_full Draft Hybrid Genome Assembly of a Canadian Cyclospora cayetanensis Isolate
title_fullStr Draft Hybrid Genome Assembly of a Canadian Cyclospora cayetanensis Isolate
title_full_unstemmed Draft Hybrid Genome Assembly of a Canadian Cyclospora cayetanensis Isolate
title_short Draft Hybrid Genome Assembly of a Canadian Cyclospora cayetanensis Isolate
title_sort draft hybrid genome assembly of a canadian cyclospora cayetanensis isolate
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8812300/
https://www.ncbi.nlm.nih.gov/pubmed/35112896
http://dx.doi.org/10.1128/mra.01072-21
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