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Bioinformatics analysis of the clinical relevance of CDCA gene family in prostate cancer

BACKGROUND: Prostate cancer (PCa) is the second most frequent cancer in men worldwide, and its mortality rate is increasing every year. The cell division cycle-associated (CDCA) gene family plays vital roles in the cell cycle process, but an analysis of these proteins in PCa is still lacking. METHOD...

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Autores principales: Gu, Peng, Yang, Dongrong, Zhu, Jin, Zhang, Minhao, He, Xiaoliang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Lippincott Williams & Wilkins 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8812703/
https://www.ncbi.nlm.nih.gov/pubmed/35119046
http://dx.doi.org/10.1097/MD.0000000000028788
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author Gu, Peng
Yang, Dongrong
Zhu, Jin
Zhang, Minhao
He, Xiaoliang
author_facet Gu, Peng
Yang, Dongrong
Zhu, Jin
Zhang, Minhao
He, Xiaoliang
author_sort Gu, Peng
collection PubMed
description BACKGROUND: Prostate cancer (PCa) is the second most frequent cancer in men worldwide, and its mortality rate is increasing every year. The cell division cycle-associated (CDCA) gene family plays vital roles in the cell cycle process, but an analysis of these proteins in PCa is still lacking. METHODS: UALCAN and GEPIA were used to examine the transcriptional data and survival of the CDCA gene family in PCa patients. CDCA genetic alterations, prognostic value of genetic alterations, and correlations of CDCAs with each other in PCa were downloaded from cBioPortal. The functional enrichment data of CDCA-related genes were analyzed using DAVID. RESULTS: Six CDCA genes were upregulated in PCa tissues relative to those in normal tissues (P < .001), including NUF2, CDCA2, CDCA3, CDCA5, CBX2, and CDCA8. The expression levels of the 6 CDCAs were related to the tumor Gleason score (P < .05). In addition, survival analysis using GEPIA suggested that PCa patients with increased NUF2, CBX2, and CDCA2/3/5/8 expression levels had poor relapse-free survival (P < .05). Distinct patterns of genetic alterations of the 6 CDCAs were observed in PCa, and pairwise comparison of the mRNA expression of the 6 CDCAs displayed a close relationship. The biological functions of CDCA-related genes are principally associated with the activation of the following pathways: cell cycle, Fanconi anemia pathway, microRNAs in cancer, oocyte meiosis, and homologous recombination. CONCLUSIONS: Upregulated CDCA (NUF2, CBX2, and CDCA2/3/5/8) expression in PCa tissues may play a crucial role in the occurrence of PCa. These CDCAs can predict relapse-free survival prognosis and the Gleason score of patients with PCa. Moreover, CDCAs probably exert their functions in tumorigenesis through the cell cycle and miRNAs in the cancer pathway.
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spelling pubmed-88127032022-02-05 Bioinformatics analysis of the clinical relevance of CDCA gene family in prostate cancer Gu, Peng Yang, Dongrong Zhu, Jin Zhang, Minhao He, Xiaoliang Medicine (Baltimore) 7300 BACKGROUND: Prostate cancer (PCa) is the second most frequent cancer in men worldwide, and its mortality rate is increasing every year. The cell division cycle-associated (CDCA) gene family plays vital roles in the cell cycle process, but an analysis of these proteins in PCa is still lacking. METHODS: UALCAN and GEPIA were used to examine the transcriptional data and survival of the CDCA gene family in PCa patients. CDCA genetic alterations, prognostic value of genetic alterations, and correlations of CDCAs with each other in PCa were downloaded from cBioPortal. The functional enrichment data of CDCA-related genes were analyzed using DAVID. RESULTS: Six CDCA genes were upregulated in PCa tissues relative to those in normal tissues (P < .001), including NUF2, CDCA2, CDCA3, CDCA5, CBX2, and CDCA8. The expression levels of the 6 CDCAs were related to the tumor Gleason score (P < .05). In addition, survival analysis using GEPIA suggested that PCa patients with increased NUF2, CBX2, and CDCA2/3/5/8 expression levels had poor relapse-free survival (P < .05). Distinct patterns of genetic alterations of the 6 CDCAs were observed in PCa, and pairwise comparison of the mRNA expression of the 6 CDCAs displayed a close relationship. The biological functions of CDCA-related genes are principally associated with the activation of the following pathways: cell cycle, Fanconi anemia pathway, microRNAs in cancer, oocyte meiosis, and homologous recombination. CONCLUSIONS: Upregulated CDCA (NUF2, CBX2, and CDCA2/3/5/8) expression in PCa tissues may play a crucial role in the occurrence of PCa. These CDCAs can predict relapse-free survival prognosis and the Gleason score of patients with PCa. Moreover, CDCAs probably exert their functions in tumorigenesis through the cell cycle and miRNAs in the cancer pathway. Lippincott Williams & Wilkins 2022-02-04 /pmc/articles/PMC8812703/ /pubmed/35119046 http://dx.doi.org/10.1097/MD.0000000000028788 Text en Copyright © 2022 the Author(s). Published by Wolters Kluwer Health, Inc. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License 4.0 (CCBY), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. http://creativecommons.org/licenses/by/4.0 (https://creativecommons.org/licenses/by/4.0/)
spellingShingle 7300
Gu, Peng
Yang, Dongrong
Zhu, Jin
Zhang, Minhao
He, Xiaoliang
Bioinformatics analysis of the clinical relevance of CDCA gene family in prostate cancer
title Bioinformatics analysis of the clinical relevance of CDCA gene family in prostate cancer
title_full Bioinformatics analysis of the clinical relevance of CDCA gene family in prostate cancer
title_fullStr Bioinformatics analysis of the clinical relevance of CDCA gene family in prostate cancer
title_full_unstemmed Bioinformatics analysis of the clinical relevance of CDCA gene family in prostate cancer
title_short Bioinformatics analysis of the clinical relevance of CDCA gene family in prostate cancer
title_sort bioinformatics analysis of the clinical relevance of cdca gene family in prostate cancer
topic 7300
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8812703/
https://www.ncbi.nlm.nih.gov/pubmed/35119046
http://dx.doi.org/10.1097/MD.0000000000028788
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