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Freely available convolutional neural network-based quantification of PET/CT lesions is associated with survival in patients with lung cancer

BACKGROUND: Metabolic positron emission tomography/computed tomography (PET/CT) parameters describing tumour activity contain valuable prognostic information, but to perform the measurements manually leads to both intra- and inter-reader variability and is too time-consuming in clinical practice. Th...

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Autores principales: Borrelli, Pablo, Góngora, José Luis Loaiza, Kaboteh, Reza, Ulén, Johannes, Enqvist, Olof, Trägårdh, Elin, Edenbrandt, Lars
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8814082/
https://www.ncbi.nlm.nih.gov/pubmed/35113252
http://dx.doi.org/10.1186/s40658-022-00437-3
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author Borrelli, Pablo
Góngora, José Luis Loaiza
Kaboteh, Reza
Ulén, Johannes
Enqvist, Olof
Trägårdh, Elin
Edenbrandt, Lars
author_facet Borrelli, Pablo
Góngora, José Luis Loaiza
Kaboteh, Reza
Ulén, Johannes
Enqvist, Olof
Trägårdh, Elin
Edenbrandt, Lars
author_sort Borrelli, Pablo
collection PubMed
description BACKGROUND: Metabolic positron emission tomography/computed tomography (PET/CT) parameters describing tumour activity contain valuable prognostic information, but to perform the measurements manually leads to both intra- and inter-reader variability and is too time-consuming in clinical practice. The use of modern artificial intelligence-based methods offers new possibilities for automated and objective image analysis of PET/CT data. PURPOSE: We aimed to train a convolutional neural network (CNN) to segment and quantify tumour burden in [(18)F]-fluorodeoxyglucose (FDG) PET/CT images and to evaluate the association between CNN-based measurements and overall survival (OS) in patients with lung cancer. A secondary aim was to make the method available to other researchers. METHODS: A total of 320 consecutive patients referred for FDG PET/CT due to suspected lung cancer were retrospectively selected for this study. Two nuclear medicine specialists manually segmented abnormal FDG uptake in all of the PET/CT studies. One-third of the patients were assigned to a test group. Survival data were collected for this group. The CNN was trained to segment lung tumours and thoracic lymph nodes. Total lesion glycolysis (TLG) was calculated from the CNN-based and manual segmentations. Associations between TLG and OS were investigated using a univariate Cox proportional hazards regression model. RESULTS: The test group comprised 106 patients (median age, 76 years (IQR 61–79); n = 59 female). Both CNN-based TLG (hazard ratio 1.64, 95% confidence interval 1.21–2.21; p = 0.001) and manual TLG (hazard ratio 1.54, 95% confidence interval 1.14–2.07; p = 0.004) estimations were significantly associated with OS. CONCLUSION: Fully automated CNN-based TLG measurements of PET/CT data showed were significantly associated with OS in patients with lung cancer. This type of measurement may be of value for the management of future patients with lung cancer. The CNN is publicly available for research purposes.
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spelling pubmed-88140822022-02-10 Freely available convolutional neural network-based quantification of PET/CT lesions is associated with survival in patients with lung cancer Borrelli, Pablo Góngora, José Luis Loaiza Kaboteh, Reza Ulén, Johannes Enqvist, Olof Trägårdh, Elin Edenbrandt, Lars EJNMMI Phys Original Research BACKGROUND: Metabolic positron emission tomography/computed tomography (PET/CT) parameters describing tumour activity contain valuable prognostic information, but to perform the measurements manually leads to both intra- and inter-reader variability and is too time-consuming in clinical practice. The use of modern artificial intelligence-based methods offers new possibilities for automated and objective image analysis of PET/CT data. PURPOSE: We aimed to train a convolutional neural network (CNN) to segment and quantify tumour burden in [(18)F]-fluorodeoxyglucose (FDG) PET/CT images and to evaluate the association between CNN-based measurements and overall survival (OS) in patients with lung cancer. A secondary aim was to make the method available to other researchers. METHODS: A total of 320 consecutive patients referred for FDG PET/CT due to suspected lung cancer were retrospectively selected for this study. Two nuclear medicine specialists manually segmented abnormal FDG uptake in all of the PET/CT studies. One-third of the patients were assigned to a test group. Survival data were collected for this group. The CNN was trained to segment lung tumours and thoracic lymph nodes. Total lesion glycolysis (TLG) was calculated from the CNN-based and manual segmentations. Associations between TLG and OS were investigated using a univariate Cox proportional hazards regression model. RESULTS: The test group comprised 106 patients (median age, 76 years (IQR 61–79); n = 59 female). Both CNN-based TLG (hazard ratio 1.64, 95% confidence interval 1.21–2.21; p = 0.001) and manual TLG (hazard ratio 1.54, 95% confidence interval 1.14–2.07; p = 0.004) estimations were significantly associated with OS. CONCLUSION: Fully automated CNN-based TLG measurements of PET/CT data showed were significantly associated with OS in patients with lung cancer. This type of measurement may be of value for the management of future patients with lung cancer. The CNN is publicly available for research purposes. Springer International Publishing 2022-02-03 /pmc/articles/PMC8814082/ /pubmed/35113252 http://dx.doi.org/10.1186/s40658-022-00437-3 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Original Research
Borrelli, Pablo
Góngora, José Luis Loaiza
Kaboteh, Reza
Ulén, Johannes
Enqvist, Olof
Trägårdh, Elin
Edenbrandt, Lars
Freely available convolutional neural network-based quantification of PET/CT lesions is associated with survival in patients with lung cancer
title Freely available convolutional neural network-based quantification of PET/CT lesions is associated with survival in patients with lung cancer
title_full Freely available convolutional neural network-based quantification of PET/CT lesions is associated with survival in patients with lung cancer
title_fullStr Freely available convolutional neural network-based quantification of PET/CT lesions is associated with survival in patients with lung cancer
title_full_unstemmed Freely available convolutional neural network-based quantification of PET/CT lesions is associated with survival in patients with lung cancer
title_short Freely available convolutional neural network-based quantification of PET/CT lesions is associated with survival in patients with lung cancer
title_sort freely available convolutional neural network-based quantification of pet/ct lesions is associated with survival in patients with lung cancer
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8814082/
https://www.ncbi.nlm.nih.gov/pubmed/35113252
http://dx.doi.org/10.1186/s40658-022-00437-3
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