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Automated meta-analysis of the event-related potential (ERP) literature
Event-related potentials (ERPs) are a common approach for investigating the neural basis of cognition and disease. There exists a vast and growing literature of ERP-related articles, the scale of which motivates the need for efficient and systematic meta-analytic approaches for characterizing this r...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8814144/ https://www.ncbi.nlm.nih.gov/pubmed/35115622 http://dx.doi.org/10.1038/s41598-022-05939-9 |
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author | Donoghue, Thomas Voytek, Bradley |
author_facet | Donoghue, Thomas Voytek, Bradley |
author_sort | Donoghue, Thomas |
collection | PubMed |
description | Event-related potentials (ERPs) are a common approach for investigating the neural basis of cognition and disease. There exists a vast and growing literature of ERP-related articles, the scale of which motivates the need for efficient and systematic meta-analytic approaches for characterizing this research. Here we present an automated text-mining approach as a form of meta-analysis to examine the relationships between ERP terms, cognitive domains and clinical disorders. We curated dictionaries of terms, collected articles of interest, and measured co-occurrence probabilities in published articles between ERP components and cognitive and disorder terms. Collectively, this literature dataset allows for creating data-driven profiles for each ERP, examining key associations of each component, and comparing the similarity across components, ultimately allowing for characterizing patterns and associations between topics and components. Additionally, by examining large literature collections, novel analyses can be done, such as examining how ERPs of different latencies relate to different cognitive associations. This openly available dataset and project can be used both as a pedagogical tool, and as a method of inquiry into the previously hidden structure of the existing literature. This project also motivates the need for consistency in naming, and for developing a clear ontology of electrophysiological components. |
format | Online Article Text |
id | pubmed-8814144 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-88141442022-02-07 Automated meta-analysis of the event-related potential (ERP) literature Donoghue, Thomas Voytek, Bradley Sci Rep Article Event-related potentials (ERPs) are a common approach for investigating the neural basis of cognition and disease. There exists a vast and growing literature of ERP-related articles, the scale of which motivates the need for efficient and systematic meta-analytic approaches for characterizing this research. Here we present an automated text-mining approach as a form of meta-analysis to examine the relationships between ERP terms, cognitive domains and clinical disorders. We curated dictionaries of terms, collected articles of interest, and measured co-occurrence probabilities in published articles between ERP components and cognitive and disorder terms. Collectively, this literature dataset allows for creating data-driven profiles for each ERP, examining key associations of each component, and comparing the similarity across components, ultimately allowing for characterizing patterns and associations between topics and components. Additionally, by examining large literature collections, novel analyses can be done, such as examining how ERPs of different latencies relate to different cognitive associations. This openly available dataset and project can be used both as a pedagogical tool, and as a method of inquiry into the previously hidden structure of the existing literature. This project also motivates the need for consistency in naming, and for developing a clear ontology of electrophysiological components. Nature Publishing Group UK 2022-02-03 /pmc/articles/PMC8814144/ /pubmed/35115622 http://dx.doi.org/10.1038/s41598-022-05939-9 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Donoghue, Thomas Voytek, Bradley Automated meta-analysis of the event-related potential (ERP) literature |
title | Automated meta-analysis of the event-related potential (ERP) literature |
title_full | Automated meta-analysis of the event-related potential (ERP) literature |
title_fullStr | Automated meta-analysis of the event-related potential (ERP) literature |
title_full_unstemmed | Automated meta-analysis of the event-related potential (ERP) literature |
title_short | Automated meta-analysis of the event-related potential (ERP) literature |
title_sort | automated meta-analysis of the event-related potential (erp) literature |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8814144/ https://www.ncbi.nlm.nih.gov/pubmed/35115622 http://dx.doi.org/10.1038/s41598-022-05939-9 |
work_keys_str_mv | AT donoghuethomas automatedmetaanalysisoftheeventrelatedpotentialerpliterature AT voytekbradley automatedmetaanalysisoftheeventrelatedpotentialerpliterature |