Cargando…
A Novel Predictive Model Incorporating Ferroptosis-Related Gene Signatures for Overall Survival in Patients with Lung Adenocarcinoma
BACKGROUND: Lung adenocarcinoma (LUAD) is the predominant histological type of lung cancer with high morbidity and mortality. Ferroptosis is regarded as a new pattern of programmed cell death concerned with the progression of lung cancer characterized by lipid peroxidation. Nevertheless, the prognos...
Autores principales: | , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Scientific Literature, Inc.
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8817619/ https://www.ncbi.nlm.nih.gov/pubmed/35102130 http://dx.doi.org/10.12659/MSM.934050 |
_version_ | 1784645685823406080 |
---|---|
author | Wang, Yuli Pan, Yanbin Wu, Jianchun Luo, Yingbin Fang, Zhihong Xu, Rongzhong Teng, Wenjing Chen, Min Li, Yan |
author_facet | Wang, Yuli Pan, Yanbin Wu, Jianchun Luo, Yingbin Fang, Zhihong Xu, Rongzhong Teng, Wenjing Chen, Min Li, Yan |
author_sort | Wang, Yuli |
collection | PubMed |
description | BACKGROUND: Lung adenocarcinoma (LUAD) is the predominant histological type of lung cancer with high morbidity and mortality. Ferroptosis is regarded as a new pattern of programmed cell death concerned with the progression of lung cancer characterized by lipid peroxidation. Nevertheless, the prognostic role of ferroptosis-related genes for LUAD warrant to be explored. MATERIAL/METHODS: RNA sequencing and relevant clinical patient data were obtained from public-access databanks. A prognostic model was constructed through the LASSO Cox regression in the cancer genome atlas cohort. The diagnostic value of the prognostic model was further evaluated in the gene expression omnibus cohort. RESULTS: Most of the ferroptosis-related genes (69.9%) were differentially expressed between tumor and adjacent non-cancerous tissues. 43 differentially expressed genes showed a close association with the prognosis of LUAD patients (adjusted p-value <0.05). An 18-gene signature was built and applied to assign patients into high vs low-risk groups. Compared with the high-risk group, patients defined as the low-risk group suffered significantly prolonged OS. Both uni- and multivariate analyses demonstrated that the signature-based score served as a crucial role in influencing the OS of LUAD patients (hazard ratio >1, p<0.001). The immunity-related signaling pathway was enriched in the functional analysis and the infiltration of the immune cells showed a great difference between groups. CONCLUSIONS: The predictive model could be applied for prognostic prediction for LUAD. Targeting ferroptosis could be a possible curative strategy against LUAD, and immunomodulation may be one of the potential mechanisms. |
format | Online Article Text |
id | pubmed-8817619 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | International Scientific Literature, Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-88176192022-02-24 A Novel Predictive Model Incorporating Ferroptosis-Related Gene Signatures for Overall Survival in Patients with Lung Adenocarcinoma Wang, Yuli Pan, Yanbin Wu, Jianchun Luo, Yingbin Fang, Zhihong Xu, Rongzhong Teng, Wenjing Chen, Min Li, Yan Med Sci Monit Database Analysis BACKGROUND: Lung adenocarcinoma (LUAD) is the predominant histological type of lung cancer with high morbidity and mortality. Ferroptosis is regarded as a new pattern of programmed cell death concerned with the progression of lung cancer characterized by lipid peroxidation. Nevertheless, the prognostic role of ferroptosis-related genes for LUAD warrant to be explored. MATERIAL/METHODS: RNA sequencing and relevant clinical patient data were obtained from public-access databanks. A prognostic model was constructed through the LASSO Cox regression in the cancer genome atlas cohort. The diagnostic value of the prognostic model was further evaluated in the gene expression omnibus cohort. RESULTS: Most of the ferroptosis-related genes (69.9%) were differentially expressed between tumor and adjacent non-cancerous tissues. 43 differentially expressed genes showed a close association with the prognosis of LUAD patients (adjusted p-value <0.05). An 18-gene signature was built and applied to assign patients into high vs low-risk groups. Compared with the high-risk group, patients defined as the low-risk group suffered significantly prolonged OS. Both uni- and multivariate analyses demonstrated that the signature-based score served as a crucial role in influencing the OS of LUAD patients (hazard ratio >1, p<0.001). The immunity-related signaling pathway was enriched in the functional analysis and the infiltration of the immune cells showed a great difference between groups. CONCLUSIONS: The predictive model could be applied for prognostic prediction for LUAD. Targeting ferroptosis could be a possible curative strategy against LUAD, and immunomodulation may be one of the potential mechanisms. International Scientific Literature, Inc. 2022-02-01 /pmc/articles/PMC8817619/ /pubmed/35102130 http://dx.doi.org/10.12659/MSM.934050 Text en © Med Sci Monit, 2022 https://creativecommons.org/licenses/by-nc-nd/4.0/This work is licensed under Creative Common Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0 (https://creativecommons.org/licenses/by-nc-nd/4.0/) ) |
spellingShingle | Database Analysis Wang, Yuli Pan, Yanbin Wu, Jianchun Luo, Yingbin Fang, Zhihong Xu, Rongzhong Teng, Wenjing Chen, Min Li, Yan A Novel Predictive Model Incorporating Ferroptosis-Related Gene Signatures for Overall Survival in Patients with Lung Adenocarcinoma |
title | A Novel Predictive Model Incorporating Ferroptosis-Related Gene Signatures for Overall Survival in Patients with Lung Adenocarcinoma |
title_full | A Novel Predictive Model Incorporating Ferroptosis-Related Gene Signatures for Overall Survival in Patients with Lung Adenocarcinoma |
title_fullStr | A Novel Predictive Model Incorporating Ferroptosis-Related Gene Signatures for Overall Survival in Patients with Lung Adenocarcinoma |
title_full_unstemmed | A Novel Predictive Model Incorporating Ferroptosis-Related Gene Signatures for Overall Survival in Patients with Lung Adenocarcinoma |
title_short | A Novel Predictive Model Incorporating Ferroptosis-Related Gene Signatures for Overall Survival in Patients with Lung Adenocarcinoma |
title_sort | novel predictive model incorporating ferroptosis-related gene signatures for overall survival in patients with lung adenocarcinoma |
topic | Database Analysis |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8817619/ https://www.ncbi.nlm.nih.gov/pubmed/35102130 http://dx.doi.org/10.12659/MSM.934050 |
work_keys_str_mv | AT wangyuli anovelpredictivemodelincorporatingferroptosisrelatedgenesignaturesforoverallsurvivalinpatientswithlungadenocarcinoma AT panyanbin anovelpredictivemodelincorporatingferroptosisrelatedgenesignaturesforoverallsurvivalinpatientswithlungadenocarcinoma AT wujianchun anovelpredictivemodelincorporatingferroptosisrelatedgenesignaturesforoverallsurvivalinpatientswithlungadenocarcinoma AT luoyingbin anovelpredictivemodelincorporatingferroptosisrelatedgenesignaturesforoverallsurvivalinpatientswithlungadenocarcinoma AT fangzhihong anovelpredictivemodelincorporatingferroptosisrelatedgenesignaturesforoverallsurvivalinpatientswithlungadenocarcinoma AT xurongzhong anovelpredictivemodelincorporatingferroptosisrelatedgenesignaturesforoverallsurvivalinpatientswithlungadenocarcinoma AT tengwenjing anovelpredictivemodelincorporatingferroptosisrelatedgenesignaturesforoverallsurvivalinpatientswithlungadenocarcinoma AT chenmin anovelpredictivemodelincorporatingferroptosisrelatedgenesignaturesforoverallsurvivalinpatientswithlungadenocarcinoma AT liyan anovelpredictivemodelincorporatingferroptosisrelatedgenesignaturesforoverallsurvivalinpatientswithlungadenocarcinoma AT wangyuli novelpredictivemodelincorporatingferroptosisrelatedgenesignaturesforoverallsurvivalinpatientswithlungadenocarcinoma AT panyanbin novelpredictivemodelincorporatingferroptosisrelatedgenesignaturesforoverallsurvivalinpatientswithlungadenocarcinoma AT wujianchun novelpredictivemodelincorporatingferroptosisrelatedgenesignaturesforoverallsurvivalinpatientswithlungadenocarcinoma AT luoyingbin novelpredictivemodelincorporatingferroptosisrelatedgenesignaturesforoverallsurvivalinpatientswithlungadenocarcinoma AT fangzhihong novelpredictivemodelincorporatingferroptosisrelatedgenesignaturesforoverallsurvivalinpatientswithlungadenocarcinoma AT xurongzhong novelpredictivemodelincorporatingferroptosisrelatedgenesignaturesforoverallsurvivalinpatientswithlungadenocarcinoma AT tengwenjing novelpredictivemodelincorporatingferroptosisrelatedgenesignaturesforoverallsurvivalinpatientswithlungadenocarcinoma AT chenmin novelpredictivemodelincorporatingferroptosisrelatedgenesignaturesforoverallsurvivalinpatientswithlungadenocarcinoma AT liyan novelpredictivemodelincorporatingferroptosisrelatedgenesignaturesforoverallsurvivalinpatientswithlungadenocarcinoma |