Cargando…

A Novel Predictive Model Incorporating Ferroptosis-Related Gene Signatures for Overall Survival in Patients with Lung Adenocarcinoma

BACKGROUND: Lung adenocarcinoma (LUAD) is the predominant histological type of lung cancer with high morbidity and mortality. Ferroptosis is regarded as a new pattern of programmed cell death concerned with the progression of lung cancer characterized by lipid peroxidation. Nevertheless, the prognos...

Descripción completa

Detalles Bibliográficos
Autores principales: Wang, Yuli, Pan, Yanbin, Wu, Jianchun, Luo, Yingbin, Fang, Zhihong, Xu, Rongzhong, Teng, Wenjing, Chen, Min, Li, Yan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Scientific Literature, Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8817619/
https://www.ncbi.nlm.nih.gov/pubmed/35102130
http://dx.doi.org/10.12659/MSM.934050
_version_ 1784645685823406080
author Wang, Yuli
Pan, Yanbin
Wu, Jianchun
Luo, Yingbin
Fang, Zhihong
Xu, Rongzhong
Teng, Wenjing
Chen, Min
Li, Yan
author_facet Wang, Yuli
Pan, Yanbin
Wu, Jianchun
Luo, Yingbin
Fang, Zhihong
Xu, Rongzhong
Teng, Wenjing
Chen, Min
Li, Yan
author_sort Wang, Yuli
collection PubMed
description BACKGROUND: Lung adenocarcinoma (LUAD) is the predominant histological type of lung cancer with high morbidity and mortality. Ferroptosis is regarded as a new pattern of programmed cell death concerned with the progression of lung cancer characterized by lipid peroxidation. Nevertheless, the prognostic role of ferroptosis-related genes for LUAD warrant to be explored. MATERIAL/METHODS: RNA sequencing and relevant clinical patient data were obtained from public-access databanks. A prognostic model was constructed through the LASSO Cox regression in the cancer genome atlas cohort. The diagnostic value of the prognostic model was further evaluated in the gene expression omnibus cohort. RESULTS: Most of the ferroptosis-related genes (69.9%) were differentially expressed between tumor and adjacent non-cancerous tissues. 43 differentially expressed genes showed a close association with the prognosis of LUAD patients (adjusted p-value <0.05). An 18-gene signature was built and applied to assign patients into high vs low-risk groups. Compared with the high-risk group, patients defined as the low-risk group suffered significantly prolonged OS. Both uni- and multivariate analyses demonstrated that the signature-based score served as a crucial role in influencing the OS of LUAD patients (hazard ratio >1, p<0.001). The immunity-related signaling pathway was enriched in the functional analysis and the infiltration of the immune cells showed a great difference between groups. CONCLUSIONS: The predictive model could be applied for prognostic prediction for LUAD. Targeting ferroptosis could be a possible curative strategy against LUAD, and immunomodulation may be one of the potential mechanisms.
format Online
Article
Text
id pubmed-8817619
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher International Scientific Literature, Inc.
record_format MEDLINE/PubMed
spelling pubmed-88176192022-02-24 A Novel Predictive Model Incorporating Ferroptosis-Related Gene Signatures for Overall Survival in Patients with Lung Adenocarcinoma Wang, Yuli Pan, Yanbin Wu, Jianchun Luo, Yingbin Fang, Zhihong Xu, Rongzhong Teng, Wenjing Chen, Min Li, Yan Med Sci Monit Database Analysis BACKGROUND: Lung adenocarcinoma (LUAD) is the predominant histological type of lung cancer with high morbidity and mortality. Ferroptosis is regarded as a new pattern of programmed cell death concerned with the progression of lung cancer characterized by lipid peroxidation. Nevertheless, the prognostic role of ferroptosis-related genes for LUAD warrant to be explored. MATERIAL/METHODS: RNA sequencing and relevant clinical patient data were obtained from public-access databanks. A prognostic model was constructed through the LASSO Cox regression in the cancer genome atlas cohort. The diagnostic value of the prognostic model was further evaluated in the gene expression omnibus cohort. RESULTS: Most of the ferroptosis-related genes (69.9%) were differentially expressed between tumor and adjacent non-cancerous tissues. 43 differentially expressed genes showed a close association with the prognosis of LUAD patients (adjusted p-value <0.05). An 18-gene signature was built and applied to assign patients into high vs low-risk groups. Compared with the high-risk group, patients defined as the low-risk group suffered significantly prolonged OS. Both uni- and multivariate analyses demonstrated that the signature-based score served as a crucial role in influencing the OS of LUAD patients (hazard ratio >1, p<0.001). The immunity-related signaling pathway was enriched in the functional analysis and the infiltration of the immune cells showed a great difference between groups. CONCLUSIONS: The predictive model could be applied for prognostic prediction for LUAD. Targeting ferroptosis could be a possible curative strategy against LUAD, and immunomodulation may be one of the potential mechanisms. International Scientific Literature, Inc. 2022-02-01 /pmc/articles/PMC8817619/ /pubmed/35102130 http://dx.doi.org/10.12659/MSM.934050 Text en © Med Sci Monit, 2022 https://creativecommons.org/licenses/by-nc-nd/4.0/This work is licensed under Creative Common Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0 (https://creativecommons.org/licenses/by-nc-nd/4.0/) )
spellingShingle Database Analysis
Wang, Yuli
Pan, Yanbin
Wu, Jianchun
Luo, Yingbin
Fang, Zhihong
Xu, Rongzhong
Teng, Wenjing
Chen, Min
Li, Yan
A Novel Predictive Model Incorporating Ferroptosis-Related Gene Signatures for Overall Survival in Patients with Lung Adenocarcinoma
title A Novel Predictive Model Incorporating Ferroptosis-Related Gene Signatures for Overall Survival in Patients with Lung Adenocarcinoma
title_full A Novel Predictive Model Incorporating Ferroptosis-Related Gene Signatures for Overall Survival in Patients with Lung Adenocarcinoma
title_fullStr A Novel Predictive Model Incorporating Ferroptosis-Related Gene Signatures for Overall Survival in Patients with Lung Adenocarcinoma
title_full_unstemmed A Novel Predictive Model Incorporating Ferroptosis-Related Gene Signatures for Overall Survival in Patients with Lung Adenocarcinoma
title_short A Novel Predictive Model Incorporating Ferroptosis-Related Gene Signatures for Overall Survival in Patients with Lung Adenocarcinoma
title_sort novel predictive model incorporating ferroptosis-related gene signatures for overall survival in patients with lung adenocarcinoma
topic Database Analysis
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8817619/
https://www.ncbi.nlm.nih.gov/pubmed/35102130
http://dx.doi.org/10.12659/MSM.934050
work_keys_str_mv AT wangyuli anovelpredictivemodelincorporatingferroptosisrelatedgenesignaturesforoverallsurvivalinpatientswithlungadenocarcinoma
AT panyanbin anovelpredictivemodelincorporatingferroptosisrelatedgenesignaturesforoverallsurvivalinpatientswithlungadenocarcinoma
AT wujianchun anovelpredictivemodelincorporatingferroptosisrelatedgenesignaturesforoverallsurvivalinpatientswithlungadenocarcinoma
AT luoyingbin anovelpredictivemodelincorporatingferroptosisrelatedgenesignaturesforoverallsurvivalinpatientswithlungadenocarcinoma
AT fangzhihong anovelpredictivemodelincorporatingferroptosisrelatedgenesignaturesforoverallsurvivalinpatientswithlungadenocarcinoma
AT xurongzhong anovelpredictivemodelincorporatingferroptosisrelatedgenesignaturesforoverallsurvivalinpatientswithlungadenocarcinoma
AT tengwenjing anovelpredictivemodelincorporatingferroptosisrelatedgenesignaturesforoverallsurvivalinpatientswithlungadenocarcinoma
AT chenmin anovelpredictivemodelincorporatingferroptosisrelatedgenesignaturesforoverallsurvivalinpatientswithlungadenocarcinoma
AT liyan anovelpredictivemodelincorporatingferroptosisrelatedgenesignaturesforoverallsurvivalinpatientswithlungadenocarcinoma
AT wangyuli novelpredictivemodelincorporatingferroptosisrelatedgenesignaturesforoverallsurvivalinpatientswithlungadenocarcinoma
AT panyanbin novelpredictivemodelincorporatingferroptosisrelatedgenesignaturesforoverallsurvivalinpatientswithlungadenocarcinoma
AT wujianchun novelpredictivemodelincorporatingferroptosisrelatedgenesignaturesforoverallsurvivalinpatientswithlungadenocarcinoma
AT luoyingbin novelpredictivemodelincorporatingferroptosisrelatedgenesignaturesforoverallsurvivalinpatientswithlungadenocarcinoma
AT fangzhihong novelpredictivemodelincorporatingferroptosisrelatedgenesignaturesforoverallsurvivalinpatientswithlungadenocarcinoma
AT xurongzhong novelpredictivemodelincorporatingferroptosisrelatedgenesignaturesforoverallsurvivalinpatientswithlungadenocarcinoma
AT tengwenjing novelpredictivemodelincorporatingferroptosisrelatedgenesignaturesforoverallsurvivalinpatientswithlungadenocarcinoma
AT chenmin novelpredictivemodelincorporatingferroptosisrelatedgenesignaturesforoverallsurvivalinpatientswithlungadenocarcinoma
AT liyan novelpredictivemodelincorporatingferroptosisrelatedgenesignaturesforoverallsurvivalinpatientswithlungadenocarcinoma