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Assessment of common and differentially expressed proteins between diabetes mellitus and fatty liver disease: a network analysis

AIM: This study aimed to introduce the main biomarkers related to NFLD and diabetes II to determine common pathogenic and metabolite factors linking NFLD to diabetes II. BACKGROUND: Nonalcoholic fatty liver disease (NFLD) is chronic hepatic failure with a broad range of hepatic disorders. NFLD and d...

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Autores principales: Saki, Kourosh, Mansouri, Vahid, Abdi, Saeed, Fathi, Mohammad, Razzaghi, Zahra, Haghazali, Mehrdad
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Shaheed Beheshti University of Medical Sciences 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8817743/
https://www.ncbi.nlm.nih.gov/pubmed/35154608
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author Saki, Kourosh
Mansouri, Vahid
Abdi, Saeed
Fathi, Mohammad
Razzaghi, Zahra
Haghazali, Mehrdad
author_facet Saki, Kourosh
Mansouri, Vahid
Abdi, Saeed
Fathi, Mohammad
Razzaghi, Zahra
Haghazali, Mehrdad
author_sort Saki, Kourosh
collection PubMed
description AIM: This study aimed to introduce the main biomarkers related to NFLD and diabetes II to determine common pathogenic and metabolite factors linking NFLD to diabetes II. BACKGROUND: Nonalcoholic fatty liver disease (NFLD) is chronic hepatic failure with a broad range of hepatic disorders. NFLD and diabetes type 2 coexist regularly to drive adverse outcomes such as hepatocellular carcinoma and vascular complications METHODS: The proteins related to NFDL and diabetes mellitus were extracted from String database. Proteins related to each disease were included in protein-protein interaction networks in Cytoscape software. Obtained networks were analyzed using Cytoscape network analyzer. The central nodes were determined as top hubs based on degree value. The top hubs related to NFLD and diabetes mellites were compared. RESULTS: In total, 200 proteins related to NFDL and diabetes mellitus were found separately in String database and connected through undirected edges in individual networks. Central nodes based on degree value were determined for each disease. Ten percent of top nodes were selected based on degree value as the 20 top hubs for each disease. Target common hub proteins between NFDL and diabetes mellitus comprised INS, AKT1, ALB, PPARG, IL6, GPDPH, LEP, TNF, ADIPOQ, IGF1, TP53, MAPK3, and SIRT1. CONCLUSION: According to the results, 13 common and 14 discriminatory central dysregulated proteins were determined for NAFLD and diabetes mellitus.
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spelling pubmed-88177432022-02-11 Assessment of common and differentially expressed proteins between diabetes mellitus and fatty liver disease: a network analysis Saki, Kourosh Mansouri, Vahid Abdi, Saeed Fathi, Mohammad Razzaghi, Zahra Haghazali, Mehrdad Gastroenterol Hepatol Bed Bench Original Article AIM: This study aimed to introduce the main biomarkers related to NFLD and diabetes II to determine common pathogenic and metabolite factors linking NFLD to diabetes II. BACKGROUND: Nonalcoholic fatty liver disease (NFLD) is chronic hepatic failure with a broad range of hepatic disorders. NFLD and diabetes type 2 coexist regularly to drive adverse outcomes such as hepatocellular carcinoma and vascular complications METHODS: The proteins related to NFDL and diabetes mellitus were extracted from String database. Proteins related to each disease were included in protein-protein interaction networks in Cytoscape software. Obtained networks were analyzed using Cytoscape network analyzer. The central nodes were determined as top hubs based on degree value. The top hubs related to NFLD and diabetes mellites were compared. RESULTS: In total, 200 proteins related to NFDL and diabetes mellitus were found separately in String database and connected through undirected edges in individual networks. Central nodes based on degree value were determined for each disease. Ten percent of top nodes were selected based on degree value as the 20 top hubs for each disease. Target common hub proteins between NFDL and diabetes mellitus comprised INS, AKT1, ALB, PPARG, IL6, GPDPH, LEP, TNF, ADIPOQ, IGF1, TP53, MAPK3, and SIRT1. CONCLUSION: According to the results, 13 common and 14 discriminatory central dysregulated proteins were determined for NAFLD and diabetes mellitus. Shaheed Beheshti University of Medical Sciences 2021 /pmc/articles/PMC8817743/ /pubmed/35154608 Text en ©2021 RIGLD, Research Institute for Gastroenterology and Liver Diseases https://creativecommons.org/licenses/by/3.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License, (http://creativecommons.org/licenses/by/3.0/ (https://creativecommons.org/licenses/by/3.0/) ) which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Saki, Kourosh
Mansouri, Vahid
Abdi, Saeed
Fathi, Mohammad
Razzaghi, Zahra
Haghazali, Mehrdad
Assessment of common and differentially expressed proteins between diabetes mellitus and fatty liver disease: a network analysis
title Assessment of common and differentially expressed proteins between diabetes mellitus and fatty liver disease: a network analysis
title_full Assessment of common and differentially expressed proteins between diabetes mellitus and fatty liver disease: a network analysis
title_fullStr Assessment of common and differentially expressed proteins between diabetes mellitus and fatty liver disease: a network analysis
title_full_unstemmed Assessment of common and differentially expressed proteins between diabetes mellitus and fatty liver disease: a network analysis
title_short Assessment of common and differentially expressed proteins between diabetes mellitus and fatty liver disease: a network analysis
title_sort assessment of common and differentially expressed proteins between diabetes mellitus and fatty liver disease: a network analysis
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8817743/
https://www.ncbi.nlm.nih.gov/pubmed/35154608
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