Cargando…

Deep Learning for Ultrasound Image Formation: CUBDL Evaluation Framework and Open Datasets

Deep learning for ultrasound image formation is rapidly garnering research support and attention, quickly rising as the latest frontier in ultrasound image formation, with much promise to balance both image quality and display speed. Despite this promise, one challenge with identifying optimal solut...

Descripción completa

Detalles Bibliográficos
Autores principales: Hyun, Dongwoon, Wiacek, Alycen, Goudarzi, Sobhan, Rothlübbers, Sven, Asif, Amir, Eickel, Klaus, Eldar, Yonina C., Huang, Jiaqi, Mischi, Massimo, Rivaz, Hassan, Sinden, David, van Sloun, Ruud J. G., Strohm, Hannah, Bell, Muyinatu A. Lediju
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8818124/
https://www.ncbi.nlm.nih.gov/pubmed/34224351
http://dx.doi.org/10.1109/TUFFC.2021.3094849
_version_ 1784645765537202176
author Hyun, Dongwoon
Wiacek, Alycen
Goudarzi, Sobhan
Rothlübbers, Sven
Asif, Amir
Eickel, Klaus
Eldar, Yonina C.
Huang, Jiaqi
Mischi, Massimo
Rivaz, Hassan
Sinden, David
van Sloun, Ruud J. G.
Strohm, Hannah
Bell, Muyinatu A. Lediju
author_facet Hyun, Dongwoon
Wiacek, Alycen
Goudarzi, Sobhan
Rothlübbers, Sven
Asif, Amir
Eickel, Klaus
Eldar, Yonina C.
Huang, Jiaqi
Mischi, Massimo
Rivaz, Hassan
Sinden, David
van Sloun, Ruud J. G.
Strohm, Hannah
Bell, Muyinatu A. Lediju
author_sort Hyun, Dongwoon
collection PubMed
description Deep learning for ultrasound image formation is rapidly garnering research support and attention, quickly rising as the latest frontier in ultrasound image formation, with much promise to balance both image quality and display speed. Despite this promise, one challenge with identifying optimal solutions is the absence of unified evaluation methods and datasets that are not specific to a single research group. This article introduces the largest known international database of ultrasound channel data and describes the associated evaluation methods that were initially developed for the challenge on ultrasound beamforming with deep learning (CUBDL), which was offered as a component of the 2020 IEEE International Ultrasonics Symposium. We summarize the challenge results and present qualitative and quantitative assessments using both the initially closed CUBDL evaluation test dataset (which was crowd-sourced from multiple groups around the world) and additional in vivo breast ultrasound data contributed after the challenge was completed. As an example quantitative assessment, single plane wave images from the CUBDL Task 1 dataset produced a mean generalized contrast-to-noise ratio (gCNR) of 0.67 and a mean lateral resolution of 0.42 mm when formed with delay-and-sum beamforming, compared with a mean gCNR as high as 0.81 and a mean lateral resolution as low as 0.32 mm when formed with networks submitted by the challenge winners. We also describe contributed CUBDL data that may be used for training of future networks. The compiled database includes a total of 576 image acquisition sequences. We additionally introduce a neural-network-based global sound speed estimator implementation that was necessary to fairly evaluate the results obtained with this international database. The integration of CUBDL evaluation methods, evaluation code, network weights from the challenge winners, and all datasets described herein are publicly available (visit https://cubdl.jhu.edu for details).
format Online
Article
Text
id pubmed-8818124
institution National Center for Biotechnology Information
language English
publishDate 2021
record_format MEDLINE/PubMed
spelling pubmed-88181242022-02-06 Deep Learning for Ultrasound Image Formation: CUBDL Evaluation Framework and Open Datasets Hyun, Dongwoon Wiacek, Alycen Goudarzi, Sobhan Rothlübbers, Sven Asif, Amir Eickel, Klaus Eldar, Yonina C. Huang, Jiaqi Mischi, Massimo Rivaz, Hassan Sinden, David van Sloun, Ruud J. G. Strohm, Hannah Bell, Muyinatu A. Lediju IEEE Trans Ultrason Ferroelectr Freq Control Article Deep learning for ultrasound image formation is rapidly garnering research support and attention, quickly rising as the latest frontier in ultrasound image formation, with much promise to balance both image quality and display speed. Despite this promise, one challenge with identifying optimal solutions is the absence of unified evaluation methods and datasets that are not specific to a single research group. This article introduces the largest known international database of ultrasound channel data and describes the associated evaluation methods that were initially developed for the challenge on ultrasound beamforming with deep learning (CUBDL), which was offered as a component of the 2020 IEEE International Ultrasonics Symposium. We summarize the challenge results and present qualitative and quantitative assessments using both the initially closed CUBDL evaluation test dataset (which was crowd-sourced from multiple groups around the world) and additional in vivo breast ultrasound data contributed after the challenge was completed. As an example quantitative assessment, single plane wave images from the CUBDL Task 1 dataset produced a mean generalized contrast-to-noise ratio (gCNR) of 0.67 and a mean lateral resolution of 0.42 mm when formed with delay-and-sum beamforming, compared with a mean gCNR as high as 0.81 and a mean lateral resolution as low as 0.32 mm when formed with networks submitted by the challenge winners. We also describe contributed CUBDL data that may be used for training of future networks. The compiled database includes a total of 576 image acquisition sequences. We additionally introduce a neural-network-based global sound speed estimator implementation that was necessary to fairly evaluate the results obtained with this international database. The integration of CUBDL evaluation methods, evaluation code, network weights from the challenge winners, and all datasets described herein are publicly available (visit https://cubdl.jhu.edu for details). 2021-12 2021-11-23 /pmc/articles/PMC8818124/ /pubmed/34224351 http://dx.doi.org/10.1109/TUFFC.2021.3094849 Text en https://creativecommons.org/licenses/by/4.0/This work is licensed under a Creative Commons Attribution 4.0 License. For more information, see https://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Hyun, Dongwoon
Wiacek, Alycen
Goudarzi, Sobhan
Rothlübbers, Sven
Asif, Amir
Eickel, Klaus
Eldar, Yonina C.
Huang, Jiaqi
Mischi, Massimo
Rivaz, Hassan
Sinden, David
van Sloun, Ruud J. G.
Strohm, Hannah
Bell, Muyinatu A. Lediju
Deep Learning for Ultrasound Image Formation: CUBDL Evaluation Framework and Open Datasets
title Deep Learning for Ultrasound Image Formation: CUBDL Evaluation Framework and Open Datasets
title_full Deep Learning for Ultrasound Image Formation: CUBDL Evaluation Framework and Open Datasets
title_fullStr Deep Learning for Ultrasound Image Formation: CUBDL Evaluation Framework and Open Datasets
title_full_unstemmed Deep Learning for Ultrasound Image Formation: CUBDL Evaluation Framework and Open Datasets
title_short Deep Learning for Ultrasound Image Formation: CUBDL Evaluation Framework and Open Datasets
title_sort deep learning for ultrasound image formation: cubdl evaluation framework and open datasets
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8818124/
https://www.ncbi.nlm.nih.gov/pubmed/34224351
http://dx.doi.org/10.1109/TUFFC.2021.3094849
work_keys_str_mv AT hyundongwoon deeplearningforultrasoundimageformationcubdlevaluationframeworkandopendatasets
AT wiacekalycen deeplearningforultrasoundimageformationcubdlevaluationframeworkandopendatasets
AT goudarzisobhan deeplearningforultrasoundimageformationcubdlevaluationframeworkandopendatasets
AT rothlubberssven deeplearningforultrasoundimageformationcubdlevaluationframeworkandopendatasets
AT asifamir deeplearningforultrasoundimageformationcubdlevaluationframeworkandopendatasets
AT eickelklaus deeplearningforultrasoundimageformationcubdlevaluationframeworkandopendatasets
AT eldaryoninac deeplearningforultrasoundimageformationcubdlevaluationframeworkandopendatasets
AT huangjiaqi deeplearningforultrasoundimageformationcubdlevaluationframeworkandopendatasets
AT mischimassimo deeplearningforultrasoundimageformationcubdlevaluationframeworkandopendatasets
AT rivazhassan deeplearningforultrasoundimageformationcubdlevaluationframeworkandopendatasets
AT sindendavid deeplearningforultrasoundimageformationcubdlevaluationframeworkandopendatasets
AT vanslounruudjg deeplearningforultrasoundimageformationcubdlevaluationframeworkandopendatasets
AT strohmhannah deeplearningforultrasoundimageformationcubdlevaluationframeworkandopendatasets
AT bellmuyinatualediju deeplearningforultrasoundimageformationcubdlevaluationframeworkandopendatasets