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Construction and comprehensive analysis of the competing endogenous RNA network in endometrial adenocarcinoma

BACKGROUND: Endometrial carcinoma (EC) is one of the most common gynecological malignant tumors. In this study, we constructed gene co-expression networks to identify key modules and hub genes involved in the pathogenesis of EC. RESULTS: The MEturquoise module was found to be significantly related t...

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Autores principales: Feng, Chong, Cui, Lei, Jin, Zhen, Sun, Lei, Wang, Xiaoyan, Chi, Xinshu, Sun, Qian, Lian, Siyu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8818217/
https://www.ncbi.nlm.nih.gov/pubmed/35123404
http://dx.doi.org/10.1186/s12863-022-01028-y
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author Feng, Chong
Cui, Lei
Jin, Zhen
Sun, Lei
Wang, Xiaoyan
Chi, Xinshu
Sun, Qian
Lian, Siyu
author_facet Feng, Chong
Cui, Lei
Jin, Zhen
Sun, Lei
Wang, Xiaoyan
Chi, Xinshu
Sun, Qian
Lian, Siyu
author_sort Feng, Chong
collection PubMed
description BACKGROUND: Endometrial carcinoma (EC) is one of the most common gynecological malignant tumors. In this study, we constructed gene co-expression networks to identify key modules and hub genes involved in the pathogenesis of EC. RESULTS: The MEturquoise module was found to be significantly related to hypertension and the MEbrown module was significantly related to the history of other malignancies. Functional enrichment analysis showed that the MEturquoise module was associated with the GO biological process terms of transcription from RNA polymerase II promoter, positive regulation of male gonad development, endocardial cushion development, and endothelial cell differentiation. The MEbrown module was associated with GO terms DNA binding, epithelial-to-mesenchymal transition, and transcription from RNA polymerase II promoter. A total of 10 hub genes were identified and compared with the available datasets at transcriptional and translational levels. CONCLUSIONS: The identified ceRNAs may play a critical role in the progression and metastasis of EC and are thus candidate therapeutic targets and potential prognostic biomarkers. The two modules constructed further provide a useful reference that will advance understanding of the mechanisms of tumorigenesis in EC. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12863-022-01028-y.
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spelling pubmed-88182172022-02-07 Construction and comprehensive analysis of the competing endogenous RNA network in endometrial adenocarcinoma Feng, Chong Cui, Lei Jin, Zhen Sun, Lei Wang, Xiaoyan Chi, Xinshu Sun, Qian Lian, Siyu BMC Genom Data Research BACKGROUND: Endometrial carcinoma (EC) is one of the most common gynecological malignant tumors. In this study, we constructed gene co-expression networks to identify key modules and hub genes involved in the pathogenesis of EC. RESULTS: The MEturquoise module was found to be significantly related to hypertension and the MEbrown module was significantly related to the history of other malignancies. Functional enrichment analysis showed that the MEturquoise module was associated with the GO biological process terms of transcription from RNA polymerase II promoter, positive regulation of male gonad development, endocardial cushion development, and endothelial cell differentiation. The MEbrown module was associated with GO terms DNA binding, epithelial-to-mesenchymal transition, and transcription from RNA polymerase II promoter. A total of 10 hub genes were identified and compared with the available datasets at transcriptional and translational levels. CONCLUSIONS: The identified ceRNAs may play a critical role in the progression and metastasis of EC and are thus candidate therapeutic targets and potential prognostic biomarkers. The two modules constructed further provide a useful reference that will advance understanding of the mechanisms of tumorigenesis in EC. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12863-022-01028-y. BioMed Central 2022-02-06 /pmc/articles/PMC8818217/ /pubmed/35123404 http://dx.doi.org/10.1186/s12863-022-01028-y Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Feng, Chong
Cui, Lei
Jin, Zhen
Sun, Lei
Wang, Xiaoyan
Chi, Xinshu
Sun, Qian
Lian, Siyu
Construction and comprehensive analysis of the competing endogenous RNA network in endometrial adenocarcinoma
title Construction and comprehensive analysis of the competing endogenous RNA network in endometrial adenocarcinoma
title_full Construction and comprehensive analysis of the competing endogenous RNA network in endometrial adenocarcinoma
title_fullStr Construction and comprehensive analysis of the competing endogenous RNA network in endometrial adenocarcinoma
title_full_unstemmed Construction and comprehensive analysis of the competing endogenous RNA network in endometrial adenocarcinoma
title_short Construction and comprehensive analysis of the competing endogenous RNA network in endometrial adenocarcinoma
title_sort construction and comprehensive analysis of the competing endogenous rna network in endometrial adenocarcinoma
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8818217/
https://www.ncbi.nlm.nih.gov/pubmed/35123404
http://dx.doi.org/10.1186/s12863-022-01028-y
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