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ER/AR Multi-Conformational Docking Server: A Tool for Discovering and Studying Estrogen and Androgen Receptor Modulators

The prediction of the estrogen receptor (ER) and androgen receptor (AR) activity of a compound is quite important to avoid the environmental exposures of endocrine-disrupting chemicals. The Estrogen and Androgen Receptor Database (EARDB, http://eardb.schanglab.org.cn/) provides a unique collection o...

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Autores principales: Wang, Feng, Hu, Shuai, Ma, De-Qing, Li, Qiuye, Li, Hong-Cheng, Liang, Jia-Yi, Chang, Shan, Kong, Ren
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8819068/
https://www.ncbi.nlm.nih.gov/pubmed/35140614
http://dx.doi.org/10.3389/fphar.2022.800885
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author Wang, Feng
Hu, Shuai
Ma, De-Qing
Li, Qiuye
Li, Hong-Cheng
Liang, Jia-Yi
Chang, Shan
Kong, Ren
author_facet Wang, Feng
Hu, Shuai
Ma, De-Qing
Li, Qiuye
Li, Hong-Cheng
Liang, Jia-Yi
Chang, Shan
Kong, Ren
author_sort Wang, Feng
collection PubMed
description The prediction of the estrogen receptor (ER) and androgen receptor (AR) activity of a compound is quite important to avoid the environmental exposures of endocrine-disrupting chemicals. The Estrogen and Androgen Receptor Database (EARDB, http://eardb.schanglab.org.cn/) provides a unique collection of reported ERα, ERβ, or AR protein structures and known small molecule modulators. With the user-uploaded query molecules, molecular docking based on multi-conformations of a single target will be performed. Moreover, the 2D similarity search against known modulators is also provided. Molecules predicted with a low binding energy or high similarity to known ERα, ERβ, or AR modulators may be potential endocrine-disrupting chemicals or new modulators. The server provides a tool to predict the endocrine activity for compounds of interests, benefiting for the ER and AR drug design and endocrine-disrupting chemical identification.
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spelling pubmed-88190682022-02-08 ER/AR Multi-Conformational Docking Server: A Tool for Discovering and Studying Estrogen and Androgen Receptor Modulators Wang, Feng Hu, Shuai Ma, De-Qing Li, Qiuye Li, Hong-Cheng Liang, Jia-Yi Chang, Shan Kong, Ren Front Pharmacol Pharmacology The prediction of the estrogen receptor (ER) and androgen receptor (AR) activity of a compound is quite important to avoid the environmental exposures of endocrine-disrupting chemicals. The Estrogen and Androgen Receptor Database (EARDB, http://eardb.schanglab.org.cn/) provides a unique collection of reported ERα, ERβ, or AR protein structures and known small molecule modulators. With the user-uploaded query molecules, molecular docking based on multi-conformations of a single target will be performed. Moreover, the 2D similarity search against known modulators is also provided. Molecules predicted with a low binding energy or high similarity to known ERα, ERβ, or AR modulators may be potential endocrine-disrupting chemicals or new modulators. The server provides a tool to predict the endocrine activity for compounds of interests, benefiting for the ER and AR drug design and endocrine-disrupting chemical identification. Frontiers Media S.A. 2022-01-24 /pmc/articles/PMC8819068/ /pubmed/35140614 http://dx.doi.org/10.3389/fphar.2022.800885 Text en Copyright © 2022 Wang, Hu, Ma, Li, Li, Liang, Chang and Kong. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Pharmacology
Wang, Feng
Hu, Shuai
Ma, De-Qing
Li, Qiuye
Li, Hong-Cheng
Liang, Jia-Yi
Chang, Shan
Kong, Ren
ER/AR Multi-Conformational Docking Server: A Tool for Discovering and Studying Estrogen and Androgen Receptor Modulators
title ER/AR Multi-Conformational Docking Server: A Tool for Discovering and Studying Estrogen and Androgen Receptor Modulators
title_full ER/AR Multi-Conformational Docking Server: A Tool for Discovering and Studying Estrogen and Androgen Receptor Modulators
title_fullStr ER/AR Multi-Conformational Docking Server: A Tool for Discovering and Studying Estrogen and Androgen Receptor Modulators
title_full_unstemmed ER/AR Multi-Conformational Docking Server: A Tool for Discovering and Studying Estrogen and Androgen Receptor Modulators
title_short ER/AR Multi-Conformational Docking Server: A Tool for Discovering and Studying Estrogen and Androgen Receptor Modulators
title_sort er/ar multi-conformational docking server: a tool for discovering and studying estrogen and androgen receptor modulators
topic Pharmacology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8819068/
https://www.ncbi.nlm.nih.gov/pubmed/35140614
http://dx.doi.org/10.3389/fphar.2022.800885
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