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Comparing transfer learning to feature optimization in microstructure classification
Human analysis of research data is slow and inefficient. In recent years, machine learning tools have advanced our capability to perform tasks normally carried out by humans, such as image segmentation and classification. In this work, we seek to further improve binary classification models for high...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8819077/ https://www.ncbi.nlm.nih.gov/pubmed/35146389 http://dx.doi.org/10.1016/j.isci.2022.103774 |
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author | Banerjee, Debanshu Sparks, Taylor D. |
author_facet | Banerjee, Debanshu Sparks, Taylor D. |
author_sort | Banerjee, Debanshu |
collection | PubMed |
description | Human analysis of research data is slow and inefficient. In recent years, machine learning tools have advanced our capability to perform tasks normally carried out by humans, such as image segmentation and classification. In this work, we seek to further improve binary classification models for high-throughput identification of different microstructural morphologies. We utilize a dataset with limited observations (133 dendritic structures, 444 non-dendritic) and employ data augmentation via rotation and translation to enhance the dataset six-fold. Then, transfer learning is carried out using pre-trained networks VGG16, InceptionV3, and Xception achieving only moderate F1 scores (0.801–0.822). We hypothesize that feature engineering could yield better results than transfer learning alone. To test this, we employ a new nature-inspired feature optimization algorithm, the Binary Red Deer Algorithm (BRDA), to carry out binary classification and observe F1 scores in the range of 0.96. |
format | Online Article Text |
id | pubmed-8819077 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-88190772022-02-09 Comparing transfer learning to feature optimization in microstructure classification Banerjee, Debanshu Sparks, Taylor D. iScience Article Human analysis of research data is slow and inefficient. In recent years, machine learning tools have advanced our capability to perform tasks normally carried out by humans, such as image segmentation and classification. In this work, we seek to further improve binary classification models for high-throughput identification of different microstructural morphologies. We utilize a dataset with limited observations (133 dendritic structures, 444 non-dendritic) and employ data augmentation via rotation and translation to enhance the dataset six-fold. Then, transfer learning is carried out using pre-trained networks VGG16, InceptionV3, and Xception achieving only moderate F1 scores (0.801–0.822). We hypothesize that feature engineering could yield better results than transfer learning alone. To test this, we employ a new nature-inspired feature optimization algorithm, the Binary Red Deer Algorithm (BRDA), to carry out binary classification and observe F1 scores in the range of 0.96. Elsevier 2022-01-15 /pmc/articles/PMC8819077/ /pubmed/35146389 http://dx.doi.org/10.1016/j.isci.2022.103774 Text en © 2022 The Authors https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Banerjee, Debanshu Sparks, Taylor D. Comparing transfer learning to feature optimization in microstructure classification |
title | Comparing transfer learning to feature optimization in microstructure classification |
title_full | Comparing transfer learning to feature optimization in microstructure classification |
title_fullStr | Comparing transfer learning to feature optimization in microstructure classification |
title_full_unstemmed | Comparing transfer learning to feature optimization in microstructure classification |
title_short | Comparing transfer learning to feature optimization in microstructure classification |
title_sort | comparing transfer learning to feature optimization in microstructure classification |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8819077/ https://www.ncbi.nlm.nih.gov/pubmed/35146389 http://dx.doi.org/10.1016/j.isci.2022.103774 |
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