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A tutorial on the use of temporal principal component analysis in developmental ERP research – Opportunities and challenges
Developmental researchers are often interested in event-related potentials (ERPs). Data-analytic approaches based on the observed ERP suffer from major problems such as arbitrary definition of analysis time windows and regions of interest and the observed ERP being a mixture of latent underlying com...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8819392/ https://www.ncbi.nlm.nih.gov/pubmed/35123341 http://dx.doi.org/10.1016/j.dcn.2022.101072 |
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author | Scharf, Florian Widmann, Andreas Bonmassar, Carolina Wetzel, Nicole |
author_facet | Scharf, Florian Widmann, Andreas Bonmassar, Carolina Wetzel, Nicole |
author_sort | Scharf, Florian |
collection | PubMed |
description | Developmental researchers are often interested in event-related potentials (ERPs). Data-analytic approaches based on the observed ERP suffer from major problems such as arbitrary definition of analysis time windows and regions of interest and the observed ERP being a mixture of latent underlying components. Temporal principal component analysis (PCA) can reduce these problems. However, its application in developmental research comes with the unique challenge that the component structure differs between age groups (so-called measurement non-invariance). Separate PCAs for the groups can cope with this challenge. We demonstrate how to make results from separate PCAs accessible for inferential statistics by re-scaling to original units. This tutorial enables readers with a focus on developmental research to conduct a PCA-based ERP analysis of amplitude differences. We explain the benefits of a PCA-based approach, introduce the PCA model and demonstrate its application to a developmental research question using real-data from a child and an adult group (code and data openly available). Finally, we discuss how to cope with typical challenges during the analysis and name potential limitations such as suboptimal decomposition results, data-driven analysis decisions and latency shifts. |
format | Online Article Text |
id | pubmed-8819392 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-88193922022-02-09 A tutorial on the use of temporal principal component analysis in developmental ERP research – Opportunities and challenges Scharf, Florian Widmann, Andreas Bonmassar, Carolina Wetzel, Nicole Dev Cogn Neurosci Original Research Developmental researchers are often interested in event-related potentials (ERPs). Data-analytic approaches based on the observed ERP suffer from major problems such as arbitrary definition of analysis time windows and regions of interest and the observed ERP being a mixture of latent underlying components. Temporal principal component analysis (PCA) can reduce these problems. However, its application in developmental research comes with the unique challenge that the component structure differs between age groups (so-called measurement non-invariance). Separate PCAs for the groups can cope with this challenge. We demonstrate how to make results from separate PCAs accessible for inferential statistics by re-scaling to original units. This tutorial enables readers with a focus on developmental research to conduct a PCA-based ERP analysis of amplitude differences. We explain the benefits of a PCA-based approach, introduce the PCA model and demonstrate its application to a developmental research question using real-data from a child and an adult group (code and data openly available). Finally, we discuss how to cope with typical challenges during the analysis and name potential limitations such as suboptimal decomposition results, data-driven analysis decisions and latency shifts. Elsevier 2022-01-15 /pmc/articles/PMC8819392/ /pubmed/35123341 http://dx.doi.org/10.1016/j.dcn.2022.101072 Text en © 2022 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Original Research Scharf, Florian Widmann, Andreas Bonmassar, Carolina Wetzel, Nicole A tutorial on the use of temporal principal component analysis in developmental ERP research – Opportunities and challenges |
title | A tutorial on the use of temporal principal component analysis in developmental ERP research – Opportunities and challenges |
title_full | A tutorial on the use of temporal principal component analysis in developmental ERP research – Opportunities and challenges |
title_fullStr | A tutorial on the use of temporal principal component analysis in developmental ERP research – Opportunities and challenges |
title_full_unstemmed | A tutorial on the use of temporal principal component analysis in developmental ERP research – Opportunities and challenges |
title_short | A tutorial on the use of temporal principal component analysis in developmental ERP research – Opportunities and challenges |
title_sort | tutorial on the use of temporal principal component analysis in developmental erp research – opportunities and challenges |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8819392/ https://www.ncbi.nlm.nih.gov/pubmed/35123341 http://dx.doi.org/10.1016/j.dcn.2022.101072 |
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