Cargando…
Crystal structure from X-ray powder diffraction data, DFT-D calculation, Hirshfeld surface analysis, and energy frameworks of (RS)-trichlormethiazide
The structure of racemic (RS)-trichlormethiazide [systematic name: (RS)-6-chloro-3-(dichloromethyl)-1,1-dioxo-3,4-dihydro-2H-1λ(6),2,4-benzothiadiazine-7-sulfonamide], C(8)H(8)Cl(3)N(3)O(4)S(2) (RS-TCMZ), a diuretic drug used in the treatment of oedema and hypertension, was determined from...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8819433/ https://www.ncbi.nlm.nih.gov/pubmed/35145740 http://dx.doi.org/10.1107/S2056989021013633 |
_version_ | 1784646060564545536 |
---|---|
author | Toro, Robert A. Dugarte-Dugarte, Analio van de Streek, Jacco Henao, José Antonio Delgado, José Miguel Díaz de Delgado, Graciela |
author_facet | Toro, Robert A. Dugarte-Dugarte, Analio van de Streek, Jacco Henao, José Antonio Delgado, José Miguel Díaz de Delgado, Graciela |
author_sort | Toro, Robert A. |
collection | PubMed |
description | The structure of racemic (RS)-trichlormethiazide [systematic name: (RS)-6-chloro-3-(dichloromethyl)-1,1-dioxo-3,4-dihydro-2H-1λ(6),2,4-benzothiadiazine-7-sulfonamide], C(8)H(8)Cl(3)N(3)O(4)S(2) (RS-TCMZ), a diuretic drug used in the treatment of oedema and hypertension, was determined from laboratory X-ray powder diffraction data using DASH [David et al. (2006 ▸). J. Appl. Cryst. 39, 910–915.], refined by the Rietveld method with TOPAS-Academic [Coelho (2018 ▸). J. Appl. Cryst. 51, 210–218], and optimized using DFT-D calculations. The extended structure consists of head-to-tail dimers connected by π–π interactions which, in turn, are connected by C—Cl⋯π interactions. They form chains propagating along [101], further connected by N—H⋯O hydrogen bonds to produce layers parallel to the ac plane that stack along the b-axis direction, connected by additional N—H⋯O hydrogen bonds. The Hirshfeld surface analysis indicates a major contribution of H⋯O and H⋯Cl interactions (32.2 and 21.7%, respectively). Energy framework calculations confirm the major contribution of electrostatic interactions (E (elec)) to the total energy (E (tot)). A comparison with the structure of S-TCMZ is also presented. |
format | Online Article Text |
id | pubmed-8819433 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-88194332022-02-09 Crystal structure from X-ray powder diffraction data, DFT-D calculation, Hirshfeld surface analysis, and energy frameworks of (RS)-trichlormethiazide Toro, Robert A. Dugarte-Dugarte, Analio van de Streek, Jacco Henao, José Antonio Delgado, José Miguel Díaz de Delgado, Graciela Acta Crystallogr E Crystallogr Commun Research Communications The structure of racemic (RS)-trichlormethiazide [systematic name: (RS)-6-chloro-3-(dichloromethyl)-1,1-dioxo-3,4-dihydro-2H-1λ(6),2,4-benzothiadiazine-7-sulfonamide], C(8)H(8)Cl(3)N(3)O(4)S(2) (RS-TCMZ), a diuretic drug used in the treatment of oedema and hypertension, was determined from laboratory X-ray powder diffraction data using DASH [David et al. (2006 ▸). J. Appl. Cryst. 39, 910–915.], refined by the Rietveld method with TOPAS-Academic [Coelho (2018 ▸). J. Appl. Cryst. 51, 210–218], and optimized using DFT-D calculations. The extended structure consists of head-to-tail dimers connected by π–π interactions which, in turn, are connected by C—Cl⋯π interactions. They form chains propagating along [101], further connected by N—H⋯O hydrogen bonds to produce layers parallel to the ac plane that stack along the b-axis direction, connected by additional N—H⋯O hydrogen bonds. The Hirshfeld surface analysis indicates a major contribution of H⋯O and H⋯Cl interactions (32.2 and 21.7%, respectively). Energy framework calculations confirm the major contribution of electrostatic interactions (E (elec)) to the total energy (E (tot)). A comparison with the structure of S-TCMZ is also presented. International Union of Crystallography 2022-01-07 /pmc/articles/PMC8819433/ /pubmed/35145740 http://dx.doi.org/10.1107/S2056989021013633 Text en © Toro et al. 2022 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited. |
spellingShingle | Research Communications Toro, Robert A. Dugarte-Dugarte, Analio van de Streek, Jacco Henao, José Antonio Delgado, José Miguel Díaz de Delgado, Graciela Crystal structure from X-ray powder diffraction data, DFT-D calculation, Hirshfeld surface analysis, and energy frameworks of (RS)-trichlormethiazide |
title | Crystal structure from X-ray powder diffraction data, DFT-D calculation, Hirshfeld surface analysis, and energy frameworks of (RS)-trichlormethiazide |
title_full | Crystal structure from X-ray powder diffraction data, DFT-D calculation, Hirshfeld surface analysis, and energy frameworks of (RS)-trichlormethiazide |
title_fullStr | Crystal structure from X-ray powder diffraction data, DFT-D calculation, Hirshfeld surface analysis, and energy frameworks of (RS)-trichlormethiazide |
title_full_unstemmed | Crystal structure from X-ray powder diffraction data, DFT-D calculation, Hirshfeld surface analysis, and energy frameworks of (RS)-trichlormethiazide |
title_short | Crystal structure from X-ray powder diffraction data, DFT-D calculation, Hirshfeld surface analysis, and energy frameworks of (RS)-trichlormethiazide |
title_sort | crystal structure from x-ray powder diffraction data, dft-d calculation, hirshfeld surface analysis, and energy frameworks of (rs)-trichlormethiazide |
topic | Research Communications |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8819433/ https://www.ncbi.nlm.nih.gov/pubmed/35145740 http://dx.doi.org/10.1107/S2056989021013633 |
work_keys_str_mv | AT tororoberta crystalstructurefromxraypowderdiffractiondatadftdcalculationhirshfeldsurfaceanalysisandenergyframeworksofrstrichlormethiazide AT dugartedugarteanalio crystalstructurefromxraypowderdiffractiondatadftdcalculationhirshfeldsurfaceanalysisandenergyframeworksofrstrichlormethiazide AT vandestreekjacco crystalstructurefromxraypowderdiffractiondatadftdcalculationhirshfeldsurfaceanalysisandenergyframeworksofrstrichlormethiazide AT henaojoseantonio crystalstructurefromxraypowderdiffractiondatadftdcalculationhirshfeldsurfaceanalysisandenergyframeworksofrstrichlormethiazide AT delgadojosemiguel crystalstructurefromxraypowderdiffractiondatadftdcalculationhirshfeldsurfaceanalysisandenergyframeworksofrstrichlormethiazide AT diazdedelgadograciela crystalstructurefromxraypowderdiffractiondatadftdcalculationhirshfeldsurfaceanalysisandenergyframeworksofrstrichlormethiazide |