Cargando…

Towards Elucidating Structure–Spectra Relationships in Rhamnogalacturonan II: Computational Protocols for Accurate (13)C and (1)H Shifts for Apiose and Its Borate Esters

Apiose is a naturally occurring, uncommon branched-chain pentose found in plant cell walls as part of the complex polysaccharide Rhamnogalacturonan II (RG-II). The structural elucidation of the three-dimensional structure of RG-II by nuclear magnetic resonance (NMR) spectroscopy is significantly com...

Descripción completa

Detalles Bibliográficos
Autores principales:	Bharadwaj, Vivek S., Westawker, Luke P., Crowley, Michael F.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Frontiers Media S.A. 2022
Materias:	Molecular Biosciences
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8820409/ https://www.ncbi.nlm.nih.gov/pubmed/35141275 http://dx.doi.org/10.3389/fmolb.2021.756219

Ejemplares similares

Synthesis of borate cross-linked rhamnogalacturonan II
por: Funakawa, Hiroya, et al.
Publicado: (2015)

Correlation of Apiose Levels and Growth Rates in Duckweeds
por: Pagliuso, Débora, et al.
Publicado: (2018)

Elucidation of Biochemical Pathways Underlying VOCs Production in A549 Cells
por: Furuhashi, Takeshi, et al.
Publicado: (2020)

Elucidating the Structural Features of ABCA1 in its Heterogeneous Membrane Environment
por: Sunidhi, S., et al.
Publicado: (2022)

Elucidating the Activation Mechanism of AMPK by Direct Pan-Activator PF-739
por: Aledavood, Elnaz, et al.
Publicado: (2021)

Elucidating the Structural and Minimal Protective Epitope of the Serogroup X Meningococcal Capsular Polysaccharide
por: Pietri, Gian Pietro, et al.
Publicado: (2021)

Elucidating Axonal Injuries Through Molecular Modelling of Myelin Sheaths and Nodes of Ranvier
por: Saeedimasine, Marzieh, et al.
Publicado: (2021)

Accurate Biomolecular Simulations Account for Electronic Polarization
por: Melcr, Josef, et al.
Publicado: (2019)

Librational Dynamics of Spin-Labeled Membranes at Cryogenic Temperatures From Echo-Detected ED-EPR Spectra
por: Bartucci, Rosa, et al.
Publicado: (2022)

Prokaryotic Chaperonins as Experimental Models for Elucidating Structure-Function Abnormalities of Human Pathogenic Mutant Counterparts
por: Conway de Macario, Everly, et al.
Publicado: (2017)

Biotransformation of gallate esters by a pH-stable tannase of mangrove-derived yeast Debaryomyces hansenii
por: Song, Lei, et al.
Publicado: (2023)

SHAPER: A Web Server for Fast and Accurate SHAPE Reactivity Prediction
por: Zhou, Yuanzhe, et al.
Publicado: (2021)

Validation of an Accurate Automated Multiplex Immunofluorescence Method for Immuno-Profiling Melanoma
por: Yaseen, Zarwa, et al.
Publicado: (2022)

Efficient and accurate diagnosis of otomycosis using an ensemble deep-learning model
por: Mao, Chenggang, et al.
Publicado: (2022)

A Thermodynamic Model for Interpreting Tryptophan Excitation-Energy-Dependent Fluorescence Spectra Provides Insight Into Protein Conformational Sampling and Stability
por: Kwok, A, et al.
Publicado: (2021)

Accurate Prediction of Hydration Sites of Proteins Using Energy Model With Atom Embedding
por: Huang, Pin, et al.
Publicado: (2021)

Whole-Slide Image Analysis of Human Pancreas Samples to Elucidate the Immunopathogenesis of Type 1 Diabetes Using the QuPath Software
por: Apaolaza, Paola S., et al.
Publicado: (2021)

Suppression of Arabidopsis GGLT1 affects growth by reducing the L‐galactose content and borate cross‐linking of rhamnogalacturonan‐II
por: Sechet, Julien, et al.
Publicado: (2018)

How to Determine Accurate Conformational Ensembles by Metadynamics Metainference: A Chignolin Study Case
por: Paissoni, Cristina, et al.
Publicado: (2021)

Identifying well-folded de novo proteins in the new era of accurate structure prediction
por: Peñas-Utrilla, Daniel, et al.
Publicado: (2022)

Mutational Landscape of Pirin and Elucidation of the Impact of Most Detrimental Missense Variants That Accelerate the Breast Cancer Pathways: A Computational Modelling Study
por: Suleman, Muhammad, et al.
Publicado: (2021)

Wrangling Shape-Shifting Morpheeins to Tackle Disease and Approach Drug Discovery
por: Jaffe, Eileen K.
Publicado: (2020)

Ligand Binding Introduces Significant Allosteric Shifts in the Locations of Protein Fluctuations
por: Kumar, Ambuj, et al.
Publicado: (2021)

Chemical shift transfer: an effective strategy for protein NMR assignment with ARTINA
por: Wetton, Henry, et al.
Publicado: (2023)

PASSer2.0: Accurate Prediction of Protein Allosteric Sites Through Automated Machine Learning
por: Xiao, Sian, et al.
Publicado: (2022)

Role of USP13 in physiology and diseases
por: Wang, Qian, et al.
Publicado: (2022)

Editorial: Advances in the therapeutic targeting of human matrix metalloproteinases in health and disease
por: Bharadwaj, Shiv, et al.
Publicado: (2023)

Aggregation-Prone Structural Ensembles of Transthyretin Collected With Regression Analysis for NMR Chemical Shift
por: Yang, Wonjin, et al.
Publicado: (2021)

Elucidating the Interactions Between Heparin/Heparan Sulfate and SARS-CoV-2-Related Proteins—An Important Strategy for Developing Novel Therapeutics for the COVID-19 Pandemic
por: Yu, Mingjia, et al.
Publicado: (2021)

LZerD Protein-Protein Docking Webserver Enhanced With de novo Structure Prediction
por: Christoffer, Charles, et al.
Publicado: (2021)

SARS-CoV-2 and Glutamine: SARS-CoV-2 Triggered Pathogenesis via Metabolic Reprograming of Glutamine in Host Cells
por: Bharadwaj, Shiv, et al.
Publicado: (2021)

Multi-Omics and Genome-Scale Modeling Reveal a Metabolic Shift During C. elegans Aging
por: Hastings, Janna, et al.
Publicado: (2019)

A Simple PB/LIE Free Energy Function Accurately Predicts the Peptide Binding Specificity of the Tiam1 PDZ Domain
por: Panel, Nicolas, et al.
Publicado: (2017)

Coupling Machine Learning and High Throughput Multiplex Digital PCR Enables Accurate Detection of Carbapenem-Resistant Genes in Clinical Isolates
por: Miglietta, Luca, et al.
Publicado: (2021)

Deciphering the enzymatic mechanism of sugar ring contraction in UDP-apiose biosynthesis
por: Savino, Simone, et al.
Publicado: (2019)

A glycoside-specific glycosyltransferase transfers apiose to flavonoid glucosides in celery
por: Straube, Henryk
Publicado: (2023)

HSD17B13: A Potential Therapeutic Target for NAFLD
por: Zhang, Hai-bo, et al.
Publicado: (2022)

Specialized pro-resolving lipid mediators regulate inflammatory macrophages: A paradigm shift from antibiotics to immunotherapy for mitigating COVID-19 pandemic
por: Kumar, Vikram, et al.
Publicado: (2023)

(13)C Labeling of Nematode Worms to Improve Metabolome Coverage by Heteronuclear Nuclear Magnetic Resonance Experiments
por: Geier, Florian M., et al.
Publicado: (2019)

Engineered CRISPR/Cas13d Sensing hTERT Selectively Inhibits the Progression of Bladder Cancer In Vitro
por: Zhuang, Chengle, et al.
Publicado: (2021)

Cannot write session to /tmp/vufind_sessions/sess_cjomfcbq30tn71lss01bgkfd8l