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The complete chloroplast genome sequence of medicinal plant Centipeda minima (Compositae)

The complete chloroplast genome sequence of Centipeda minima (L.) A. Braun et Aschers (Compositae) has been characterized by Illumina pair-end sequencing. The chloroplast genome is 152,351 bp in length, including a pair of inverted repeats (IRs) of 25,004 bp (12.1%) and a large single copy (LSC) and...

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Autores principales: Ouyang, Xianheng, Chen, Anliang, Mao, Yangjun, Zhang, Kui, Gui, Peng, Yang, Yang, Zuo, Luying
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8820791/
https://www.ncbi.nlm.nih.gov/pubmed/35141416
http://dx.doi.org/10.1080/23802359.2022.2032437
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author Ouyang, Xianheng
Chen, Anliang
Mao, Yangjun
Zhang, Kui
Gui, Peng
Yang, Yang
Zuo, Luying
author_facet Ouyang, Xianheng
Chen, Anliang
Mao, Yangjun
Zhang, Kui
Gui, Peng
Yang, Yang
Zuo, Luying
author_sort Ouyang, Xianheng
collection PubMed
description The complete chloroplast genome sequence of Centipeda minima (L.) A. Braun et Aschers (Compositae) has been characterized by Illumina pair-end sequencing. The chloroplast genome is 152,351 bp in length, including a pair of inverted repeats (IRs) of 25,004 bp (12.1%) and a large single copy (LSC) and a small single copy (SSC) region of 83,972 bp (55.1%) and 18,371 bp (32.8%), respectively. The chloroplast genome includes 127 genes, which contain 83 protein-coding genes, 36 transfer RNA genes, and 8 ribosomal RNA genes. The nucleotide composition is asymmetric (31.1% A, 18.5% C, 19.0% G, 31.4% T). The overall GC content of C. minima chloroplast genome is 37.5%. Phylogenetic analysis illustrates that C. minima is closely related to other Asteraceae species, including Helianthus annuus subsp. texanus, Tithonia diversifolia and Xanthium sibiricum with a strong bootstrap value of 100.
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spelling pubmed-88207912022-02-08 The complete chloroplast genome sequence of medicinal plant Centipeda minima (Compositae) Ouyang, Xianheng Chen, Anliang Mao, Yangjun Zhang, Kui Gui, Peng Yang, Yang Zuo, Luying Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast genome sequence of Centipeda minima (L.) A. Braun et Aschers (Compositae) has been characterized by Illumina pair-end sequencing. The chloroplast genome is 152,351 bp in length, including a pair of inverted repeats (IRs) of 25,004 bp (12.1%) and a large single copy (LSC) and a small single copy (SSC) region of 83,972 bp (55.1%) and 18,371 bp (32.8%), respectively. The chloroplast genome includes 127 genes, which contain 83 protein-coding genes, 36 transfer RNA genes, and 8 ribosomal RNA genes. The nucleotide composition is asymmetric (31.1% A, 18.5% C, 19.0% G, 31.4% T). The overall GC content of C. minima chloroplast genome is 37.5%. Phylogenetic analysis illustrates that C. minima is closely related to other Asteraceae species, including Helianthus annuus subsp. texanus, Tithonia diversifolia and Xanthium sibiricum with a strong bootstrap value of 100. Taylor & Francis 2022-02-03 /pmc/articles/PMC8820791/ /pubmed/35141416 http://dx.doi.org/10.1080/23802359.2022.2032437 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Ouyang, Xianheng
Chen, Anliang
Mao, Yangjun
Zhang, Kui
Gui, Peng
Yang, Yang
Zuo, Luying
The complete chloroplast genome sequence of medicinal plant Centipeda minima (Compositae)
title The complete chloroplast genome sequence of medicinal plant Centipeda minima (Compositae)
title_full The complete chloroplast genome sequence of medicinal plant Centipeda minima (Compositae)
title_fullStr The complete chloroplast genome sequence of medicinal plant Centipeda minima (Compositae)
title_full_unstemmed The complete chloroplast genome sequence of medicinal plant Centipeda minima (Compositae)
title_short The complete chloroplast genome sequence of medicinal plant Centipeda minima (Compositae)
title_sort complete chloroplast genome sequence of medicinal plant centipeda minima (compositae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8820791/
https://www.ncbi.nlm.nih.gov/pubmed/35141416
http://dx.doi.org/10.1080/23802359.2022.2032437
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