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The complete chloroplast genome sequence of medicinal plant Centipeda minima (Compositae)
The complete chloroplast genome sequence of Centipeda minima (L.) A. Braun et Aschers (Compositae) has been characterized by Illumina pair-end sequencing. The chloroplast genome is 152,351 bp in length, including a pair of inverted repeats (IRs) of 25,004 bp (12.1%) and a large single copy (LSC) and...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8820791/ https://www.ncbi.nlm.nih.gov/pubmed/35141416 http://dx.doi.org/10.1080/23802359.2022.2032437 |
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author | Ouyang, Xianheng Chen, Anliang Mao, Yangjun Zhang, Kui Gui, Peng Yang, Yang Zuo, Luying |
author_facet | Ouyang, Xianheng Chen, Anliang Mao, Yangjun Zhang, Kui Gui, Peng Yang, Yang Zuo, Luying |
author_sort | Ouyang, Xianheng |
collection | PubMed |
description | The complete chloroplast genome sequence of Centipeda minima (L.) A. Braun et Aschers (Compositae) has been characterized by Illumina pair-end sequencing. The chloroplast genome is 152,351 bp in length, including a pair of inverted repeats (IRs) of 25,004 bp (12.1%) and a large single copy (LSC) and a small single copy (SSC) region of 83,972 bp (55.1%) and 18,371 bp (32.8%), respectively. The chloroplast genome includes 127 genes, which contain 83 protein-coding genes, 36 transfer RNA genes, and 8 ribosomal RNA genes. The nucleotide composition is asymmetric (31.1% A, 18.5% C, 19.0% G, 31.4% T). The overall GC content of C. minima chloroplast genome is 37.5%. Phylogenetic analysis illustrates that C. minima is closely related to other Asteraceae species, including Helianthus annuus subsp. texanus, Tithonia diversifolia and Xanthium sibiricum with a strong bootstrap value of 100. |
format | Online Article Text |
id | pubmed-8820791 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-88207912022-02-08 The complete chloroplast genome sequence of medicinal plant Centipeda minima (Compositae) Ouyang, Xianheng Chen, Anliang Mao, Yangjun Zhang, Kui Gui, Peng Yang, Yang Zuo, Luying Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast genome sequence of Centipeda minima (L.) A. Braun et Aschers (Compositae) has been characterized by Illumina pair-end sequencing. The chloroplast genome is 152,351 bp in length, including a pair of inverted repeats (IRs) of 25,004 bp (12.1%) and a large single copy (LSC) and a small single copy (SSC) region of 83,972 bp (55.1%) and 18,371 bp (32.8%), respectively. The chloroplast genome includes 127 genes, which contain 83 protein-coding genes, 36 transfer RNA genes, and 8 ribosomal RNA genes. The nucleotide composition is asymmetric (31.1% A, 18.5% C, 19.0% G, 31.4% T). The overall GC content of C. minima chloroplast genome is 37.5%. Phylogenetic analysis illustrates that C. minima is closely related to other Asteraceae species, including Helianthus annuus subsp. texanus, Tithonia diversifolia and Xanthium sibiricum with a strong bootstrap value of 100. Taylor & Francis 2022-02-03 /pmc/articles/PMC8820791/ /pubmed/35141416 http://dx.doi.org/10.1080/23802359.2022.2032437 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Ouyang, Xianheng Chen, Anliang Mao, Yangjun Zhang, Kui Gui, Peng Yang, Yang Zuo, Luying The complete chloroplast genome sequence of medicinal plant Centipeda minima (Compositae) |
title | The complete chloroplast genome sequence of medicinal plant Centipeda minima (Compositae) |
title_full | The complete chloroplast genome sequence of medicinal plant Centipeda minima (Compositae) |
title_fullStr | The complete chloroplast genome sequence of medicinal plant Centipeda minima (Compositae) |
title_full_unstemmed | The complete chloroplast genome sequence of medicinal plant Centipeda minima (Compositae) |
title_short | The complete chloroplast genome sequence of medicinal plant Centipeda minima (Compositae) |
title_sort | complete chloroplast genome sequence of medicinal plant centipeda minima (compositae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8820791/ https://www.ncbi.nlm.nih.gov/pubmed/35141416 http://dx.doi.org/10.1080/23802359.2022.2032437 |
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