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Characterization of the complete chloroplast genome of Carya laciniosa (F.Michx.) G.Don (Juglandaceae)

Carya laciniosa (F.Michx.) G.Don is a slow-growing valuable tree in the family Juglandaceae. In this research, we first reported the chloroplast genome sequence of C. laciniosa. The chloroplast genome was a circular form with 160,832 bp in size, comprising four subregions: a large single-copy (LSC)...

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Autores principales: Zhai, Min, Jia, Xiao-Dong, Zhang, Ji-Yu, Guo, Zhong-Ren, Xuan, Ji-Ping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8820796/
https://www.ncbi.nlm.nih.gov/pubmed/35141403
http://dx.doi.org/10.1080/23802359.2021.1906178
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author Zhai, Min
Jia, Xiao-Dong
Zhang, Ji-Yu
Guo, Zhong-Ren
Xuan, Ji-Ping
author_facet Zhai, Min
Jia, Xiao-Dong
Zhang, Ji-Yu
Guo, Zhong-Ren
Xuan, Ji-Ping
author_sort Zhai, Min
collection PubMed
description Carya laciniosa (F.Michx.) G.Don is a slow-growing valuable tree in the family Juglandaceae. In this research, we first reported the chloroplast genome sequence of C. laciniosa. The chloroplast genome was a circular form with 160,832 bp in size, comprising four subregions: a large single-copy (LSC) region of 90,065 bp, a small single-copy (SSC) region of 18,791 bp, and two copies of inverted repeats (IRs; IRa and IRb) of 25,988 bp each. A total of 132 genes were annotated in the chloroplast genome of C. laciniosa, including 87 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The overall GC content of the whole genome was 36.14%. Phylogenetic analysis suggested that C. laciniosa was closely related to C. ovata.
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spelling pubmed-88207962022-02-08 Characterization of the complete chloroplast genome of Carya laciniosa (F.Michx.) G.Don (Juglandaceae) Zhai, Min Jia, Xiao-Dong Zhang, Ji-Yu Guo, Zhong-Ren Xuan, Ji-Ping Mitochondrial DNA B Resour Mitogenome Announcement Carya laciniosa (F.Michx.) G.Don is a slow-growing valuable tree in the family Juglandaceae. In this research, we first reported the chloroplast genome sequence of C. laciniosa. The chloroplast genome was a circular form with 160,832 bp in size, comprising four subregions: a large single-copy (LSC) region of 90,065 bp, a small single-copy (SSC) region of 18,791 bp, and two copies of inverted repeats (IRs; IRa and IRb) of 25,988 bp each. A total of 132 genes were annotated in the chloroplast genome of C. laciniosa, including 87 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The overall GC content of the whole genome was 36.14%. Phylogenetic analysis suggested that C. laciniosa was closely related to C. ovata. Taylor & Francis 2021-04-09 /pmc/articles/PMC8820796/ /pubmed/35141403 http://dx.doi.org/10.1080/23802359.2021.1906178 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zhai, Min
Jia, Xiao-Dong
Zhang, Ji-Yu
Guo, Zhong-Ren
Xuan, Ji-Ping
Characterization of the complete chloroplast genome of Carya laciniosa (F.Michx.) G.Don (Juglandaceae)
title Characterization of the complete chloroplast genome of Carya laciniosa (F.Michx.) G.Don (Juglandaceae)
title_full Characterization of the complete chloroplast genome of Carya laciniosa (F.Michx.) G.Don (Juglandaceae)
title_fullStr Characterization of the complete chloroplast genome of Carya laciniosa (F.Michx.) G.Don (Juglandaceae)
title_full_unstemmed Characterization of the complete chloroplast genome of Carya laciniosa (F.Michx.) G.Don (Juglandaceae)
title_short Characterization of the complete chloroplast genome of Carya laciniosa (F.Michx.) G.Don (Juglandaceae)
title_sort characterization of the complete chloroplast genome of carya laciniosa (f.michx.) g.don (juglandaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8820796/
https://www.ncbi.nlm.nih.gov/pubmed/35141403
http://dx.doi.org/10.1080/23802359.2021.1906178
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