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A pilot study for the prediction of liver function related scores using breath biomarkers and machine learning

Volatile organic compounds (VOCs) present in exhaled breath can help in analysing biochemical processes in the human body. Liver diseases can be traced using VOCs as biomarkers for physiological and pathophysiological conditions. In this work, we propose non-invasive and quick breath monitoring appr...

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Autores principales: Patnaik, Rakesh Kumar, Lin, Yu-Chen, Agarwal, Ashish, Ho, Ming-Chih, Yeh, J. Andrew
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8821604/
https://www.ncbi.nlm.nih.gov/pubmed/35132067
http://dx.doi.org/10.1038/s41598-022-05808-5
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author Patnaik, Rakesh Kumar
Lin, Yu-Chen
Agarwal, Ashish
Ho, Ming-Chih
Yeh, J. Andrew
author_facet Patnaik, Rakesh Kumar
Lin, Yu-Chen
Agarwal, Ashish
Ho, Ming-Chih
Yeh, J. Andrew
author_sort Patnaik, Rakesh Kumar
collection PubMed
description Volatile organic compounds (VOCs) present in exhaled breath can help in analysing biochemical processes in the human body. Liver diseases can be traced using VOCs as biomarkers for physiological and pathophysiological conditions. In this work, we propose non-invasive and quick breath monitoring approach for early detection and progress monitoring of liver diseases using Isoprene, Limonene, and Dimethyl sulphide (DMS) as potential biomarkers. A pilot study is performed to design a dataset that includes the biomarkers concentration analysed from the breath sample before and after study subjects performed an exercise. A machine learning approach is applied for the prediction of scores for liver function diagnosis. Four regression methods are performed to predict the clinical scores using breath biomarkers data as features set by the machine learning techniques. A significant difference was observed for isoprene concentration (p < 0.01) and for DMS concentration (p < 0.0001) between liver patients and healthy subject’s breath sample. The R-square value between actual clinical score and predicted clinical score is found to be 0.78, 0.82, and 0.85 for CTP score, APRI score, and MELD score, respectively. Our results have shown a promising result with significant different breath profiles between liver patients and healthy volunteers. The use of machine learning for the prediction of scores is found very promising for use of breath biomarkers for liver function diagnosis.
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spelling pubmed-88216042022-02-09 A pilot study for the prediction of liver function related scores using breath biomarkers and machine learning Patnaik, Rakesh Kumar Lin, Yu-Chen Agarwal, Ashish Ho, Ming-Chih Yeh, J. Andrew Sci Rep Article Volatile organic compounds (VOCs) present in exhaled breath can help in analysing biochemical processes in the human body. Liver diseases can be traced using VOCs as biomarkers for physiological and pathophysiological conditions. In this work, we propose non-invasive and quick breath monitoring approach for early detection and progress monitoring of liver diseases using Isoprene, Limonene, and Dimethyl sulphide (DMS) as potential biomarkers. A pilot study is performed to design a dataset that includes the biomarkers concentration analysed from the breath sample before and after study subjects performed an exercise. A machine learning approach is applied for the prediction of scores for liver function diagnosis. Four regression methods are performed to predict the clinical scores using breath biomarkers data as features set by the machine learning techniques. A significant difference was observed for isoprene concentration (p < 0.01) and for DMS concentration (p < 0.0001) between liver patients and healthy subject’s breath sample. The R-square value between actual clinical score and predicted clinical score is found to be 0.78, 0.82, and 0.85 for CTP score, APRI score, and MELD score, respectively. Our results have shown a promising result with significant different breath profiles between liver patients and healthy volunteers. The use of machine learning for the prediction of scores is found very promising for use of breath biomarkers for liver function diagnosis. Nature Publishing Group UK 2022-02-07 /pmc/articles/PMC8821604/ /pubmed/35132067 http://dx.doi.org/10.1038/s41598-022-05808-5 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Patnaik, Rakesh Kumar
Lin, Yu-Chen
Agarwal, Ashish
Ho, Ming-Chih
Yeh, J. Andrew
A pilot study for the prediction of liver function related scores using breath biomarkers and machine learning
title A pilot study for the prediction of liver function related scores using breath biomarkers and machine learning
title_full A pilot study for the prediction of liver function related scores using breath biomarkers and machine learning
title_fullStr A pilot study for the prediction of liver function related scores using breath biomarkers and machine learning
title_full_unstemmed A pilot study for the prediction of liver function related scores using breath biomarkers and machine learning
title_short A pilot study for the prediction of liver function related scores using breath biomarkers and machine learning
title_sort pilot study for the prediction of liver function related scores using breath biomarkers and machine learning
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8821604/
https://www.ncbi.nlm.nih.gov/pubmed/35132067
http://dx.doi.org/10.1038/s41598-022-05808-5
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