Cargando…

Cross-Cohort Microbiome Analysis of Salivary Biomarkers in Patients With Type 2 Diabetes Mellitus

Several studies have ascertained differences in salivary microbiota between patients with type 2 diabetes mellitus (T2DM) and healthy populations. However, the predictive accuracy and reproducibility of these 16S rRNA sequencing analyses when applied to other cohorts remain enigmatic. A comprehensiv...

Descripción completa

Detalles Bibliográficos
Autores principales: Gao, Chuqi, Guo, Ying, Chen, Feng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8821939/
https://www.ncbi.nlm.nih.gov/pubmed/35145929
http://dx.doi.org/10.3389/fcimb.2022.816526
_version_ 1784646503217758208
author Gao, Chuqi
Guo, Ying
Chen, Feng
author_facet Gao, Chuqi
Guo, Ying
Chen, Feng
author_sort Gao, Chuqi
collection PubMed
description Several studies have ascertained differences in salivary microbiota between patients with type 2 diabetes mellitus (T2DM) and healthy populations. However, the predictive accuracy and reproducibility of these 16S rRNA sequencing analyses when applied to other cohorts remain enigmatic. A comprehensive analysis was conducted on the included 470 samples from five researches in publicly available databases. The discrepancy and predictive accuracy of salivary microbiota between T2DM patients and healthy populations were evaluated from multiple perspectives, followed by the identification of salivary biomarkers for DM. Next, a classification model (areas under the curves = 0.92) was developed based on a large sample. The model could be used for clinical diagnosis and prognostic monitoring and as a basis for hypothesis-driven mechanistic researches. Furthermore, the research heterogeneity across geographic regions suggested that microbiological markers might not become a uniform clinical standard in human beings. They rather identify abnormal alterations under the microbiological characteristics of a specific population.
format Online
Article
Text
id pubmed-8821939
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-88219392022-02-09 Cross-Cohort Microbiome Analysis of Salivary Biomarkers in Patients With Type 2 Diabetes Mellitus Gao, Chuqi Guo, Ying Chen, Feng Front Cell Infect Microbiol Cellular and Infection Microbiology Several studies have ascertained differences in salivary microbiota between patients with type 2 diabetes mellitus (T2DM) and healthy populations. However, the predictive accuracy and reproducibility of these 16S rRNA sequencing analyses when applied to other cohorts remain enigmatic. A comprehensive analysis was conducted on the included 470 samples from five researches in publicly available databases. The discrepancy and predictive accuracy of salivary microbiota between T2DM patients and healthy populations were evaluated from multiple perspectives, followed by the identification of salivary biomarkers for DM. Next, a classification model (areas under the curves = 0.92) was developed based on a large sample. The model could be used for clinical diagnosis and prognostic monitoring and as a basis for hypothesis-driven mechanistic researches. Furthermore, the research heterogeneity across geographic regions suggested that microbiological markers might not become a uniform clinical standard in human beings. They rather identify abnormal alterations under the microbiological characteristics of a specific population. Frontiers Media S.A. 2022-01-25 /pmc/articles/PMC8821939/ /pubmed/35145929 http://dx.doi.org/10.3389/fcimb.2022.816526 Text en Copyright © 2022 Gao, Guo and Chen https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Cellular and Infection Microbiology
Gao, Chuqi
Guo, Ying
Chen, Feng
Cross-Cohort Microbiome Analysis of Salivary Biomarkers in Patients With Type 2 Diabetes Mellitus
title Cross-Cohort Microbiome Analysis of Salivary Biomarkers in Patients With Type 2 Diabetes Mellitus
title_full Cross-Cohort Microbiome Analysis of Salivary Biomarkers in Patients With Type 2 Diabetes Mellitus
title_fullStr Cross-Cohort Microbiome Analysis of Salivary Biomarkers in Patients With Type 2 Diabetes Mellitus
title_full_unstemmed Cross-Cohort Microbiome Analysis of Salivary Biomarkers in Patients With Type 2 Diabetes Mellitus
title_short Cross-Cohort Microbiome Analysis of Salivary Biomarkers in Patients With Type 2 Diabetes Mellitus
title_sort cross-cohort microbiome analysis of salivary biomarkers in patients with type 2 diabetes mellitus
topic Cellular and Infection Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8821939/
https://www.ncbi.nlm.nih.gov/pubmed/35145929
http://dx.doi.org/10.3389/fcimb.2022.816526
work_keys_str_mv AT gaochuqi crosscohortmicrobiomeanalysisofsalivarybiomarkersinpatientswithtype2diabetesmellitus
AT guoying crosscohortmicrobiomeanalysisofsalivarybiomarkersinpatientswithtype2diabetesmellitus
AT chenfeng crosscohortmicrobiomeanalysisofsalivarybiomarkersinpatientswithtype2diabetesmellitus