Cargando…

Mapping the m1A, m5C, m6A and m7G methylation atlas in zebrafish brain under hypoxic conditions by MeRIP-seq

BACKGROUND: The epigenetic modifications play important regulatory roles in tissue development, maintenance of physiological functions and pathological process. RNA methylations, including newly identified m1A, m5C, m6A and m7G, are important epigenetic modifications. However, how these modification...

Descripción completa

Detalles Bibliográficos
Autores principales:	Li, Wei, Li, Xiaoyu, Ma, Xunjie, Xiao, Wei, Zhang, Jingjing
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2022
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8822802/ https://www.ncbi.nlm.nih.gov/pubmed/35135476 http://dx.doi.org/10.1186/s12864-022-08350-w

Ejemplares similares

Limits in the detection of m(6)A changes using MeRIP/m(6)A-seq
por: McIntyre, Alexa B. R., et al.
Publicado: (2020)

A hierarchical model for clustering m(6)A methylation peaks in MeRIP-seq data
por: Cui, Xiaodong, et al.
Publicado: (2016)

MeRIP-PF: An Easy-to-use Pipeline for High-resolution Peak-finding in MeRIP-Seq Data
por: Li, Yuli, et al.
Publicado: (2013)

A novel algorithm for calling mRNA m(6)A peaks by modeling biological variances in MeRIP-seq data
por: Cui, Xiaodong, et al.
Publicado: (2016)

Validated Impacts of N6-Methyladenosine Methylated mRNAs on Apoptosis and Angiogenesis in Myocardial Infarction Based on MeRIP-Seq Analysis
por: Zhang, Yingjie, et al.
Publicado: (2022)

Identification and comparison of m6A modifications in glioblastoma non-coding RNAs with MeRIP-seq and Nanopore dRNA-seq
por: Krusnauskas, Raulas, et al.
Publicado: (2023)

Comprehensive Analysis of the Transcriptome-Wide m6A Methylome in Pterygium by MeRIP Sequencing
por: Jiang, Yaping, et al.
Publicado: (2021)

Comprehensive Analysis of the Transcriptome-wide m6A Methylome in Lung Adenocarcinoma by MeRIP Sequencing
por: Mao, Wenli, et al.
Publicado: (2022)

Comprehensive analysis of m(6)A circRNAs identified in colorectal cancer by MeRIP sequencing
por: He, Feng, et al.
Publicado: (2022)

Corrigendum: Comprehensive analysis of the transcriptome-wide m6A methylome in lung adenocarcinoma by MeRIP sequencing
por: Mao, Wenli, et al.
Publicado: (2022)

MoAIMS: efficient software for detection of enriched regions of MeRIP-Seq
por: Zhang, Yiqian, et al.
Publicado: (2020)

RADAR: differential analysis of MeRIP-seq data with a random effect model
por: Zhang, Zijie, et al.
Publicado: (2019)

The Important Role of m6A-Modified circRNAs in the Differentiation of Intramuscular Adipocytes in Goats Based on MeRIP Sequencing Analysis
por: Wang, Jianmei, et al.
Publicado: (2023)

Identifying key m(6)A-methylated lncRNAs and genes associated with neural tube defects via integrative MeRIP and RNA sequencing analyses
por: Yang, Jing, et al.
Publicado: (2022)

Corrigendum: Identifying key m(6)A-methylated lncRNAs and genes associated with neural tube defects via integrative MeRIP and RNA sequencing analyses
por: Yang, Jing, et al.
Publicado: (2023)

Comprehensive Analysis of the Transcriptome-Wide m6A Methylome of Heart via MeRIP After Birth: Day 0 vs. Day 7
por: Yang, Chuanxi, et al.
Publicado: (2021)

Comprehensive Analysis of 5-Methylcytosine Profiles of Messenger RNA in Human High-Grade Serous Ovarian Cancer by MeRIP Sequencing
por: Meng, Li, et al.
Publicado: (2021)

m6aViewer: software for the detection, analysis, and visualization of N(6)-methyladenosine peaks from m(6)A-seq/ME-RIP sequencing data
por: Antanaviciute, Agne, et al.
Publicado: (2017)

Genome-wide identification of Wig-1 mRNA targets by RIP-Seq analysis
por: Bersani, Cinzia, et al.
Publicado: (2015)

MePMe-seq: antibody-free simultaneous m(6)A and m(5)C mapping in mRNA by metabolic propargyl labeling and sequencing
por: Hartstock, Katja, et al.
Publicado: (2023)

m(6)Am-seq reveals the dynamic m(6)Am methylation in the human transcriptome
por: Sun, Hanxiao, et al.
Publicado: (2021)

Recursive Indirect-Paths Modularity (RIP-M) for Detecting Community Structure in RNA-Seq Co-expression Networks
por: Rahmani, Bahareh, et al.
Publicado: (2016)

RIP-seq reveals LINE-1 ORF1p association with p-body enriched mRNAs
por: Briggs, Erica M., et al.
Publicado: (2021)

To me, or not to me: Effects of mRNA adenine methylation on biotic stress responses
por: Sanchez-Muñoz, Raul
Publicado: (2023)

Corrigendum: Nm-seq maps 2'-O-methylation sites in human mRNA with base precision
Publicado: (2018)

BaM-seq and TBaM-seq, highly multiplexed and targeted RNA-seq protocols for rapid, low-cost library generation from bacterial samples
por: Johnson, Grace E, et al.
Publicado: (2023)

The role of mRNA m(6)A methylation in the nervous system
por: Li, Jiashuo, et al.
Publicado: (2019)

Autophagy Suppresses RIP Kinase-Dependent Necrosis Enabling Survival to mTOR Inhibition
por: Bray, Kevin, et al.
Publicado: (2012)

Integrated mRNA-seq and miRNA-seq analysis of goat fibroblasts response to Brucella Melitensis strain M5-90
por: Li, Baobao, et al.
Publicado: (2021)

Genome-wide RIP-Chip analysis of translational repressor-bound mRNAs in the Plasmodium gametocyte
por: Guerreiro, Ana, et al.
Publicado: (2014)

Coordination of m(6)A mRNA Methylation and Gene Transcriptome in Sugarcane Response to Drought Stress
por: Wei, Jinju, et al.
Publicado: (2023)

High-throughput m(6)A-seq reveals RNA m(6)A methylation patterns in the chloroplast and mitochondria transcriptomes of Arabidopsis thaliana
por: Wang, Zegang, et al.
Publicado: (2017)

Abnormality of m6A mRNA Methylation Is Involved in Alzheimer’s Disease
por: Han, Min, et al.
Publicado: (2020)

Integration of Immune Cell Populations, mRNA-Seq, and CpG Methylation to Better Predict Humoral Immunity to Influenza Vaccination: Dependence of mRNA-Seq/CpG Methylation on Immune Cell Populations
por: Zimmermann, Michael T., et al.
Publicado: (2017)

Mapping the substrate specificity of the Plasmodium M1 and M17 aminopeptidases
por: Malcolm, Tess R., et al.
Publicado: (2021)

Abundant DNA 6mA methylation during early embryogenesis of zebrafish and pig
por: Liu, Jianzhao, et al.
Publicado: (2016)

Decoding m(6)A mRNA methylation by reader proteins in liver diseases
por: Sun, Lijiao, et al.
Publicado: (2023)

200 mA from 3 MeV
Publicado: (1971)

200 mA au 3 MeV
Publicado: (1971)

M'Alpine's Zoological Atlas
Publicado: (1881)

Cannot write session to /tmp/vufind_sessions/sess_cfrlrp4fdu5k7ftvacdirfevo0