Cargando…

4471 Interactions of the Infant Nasopharyngeal Microbiota and Subjects’ Clinical Traits in Development of Viral Upper Respiratory Tract Infections and Acute Otitis Media

OBJECTIVES/GOALS: Identify the interactions between nasopharyngeal bacterial pathogens, commensals, and patient clinical characteristics in relation to the development of viral upper respiratory tract infections (URI) and acute otitis media (AOM) in infants. METHODS/STUDY POPULATION: The subjects we...

Descripción completa

Detalles Bibliográficos
Autores principales: Khanipov, Kamil, Golovko, George, Nia, Anna, Evangelista, Lorraine, Fofanov, Yuriy
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cambridge University Press 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8822968/
http://dx.doi.org/10.1017/cts.2020.179
_version_ 1784646713985728512
author Khanipov, Kamil
Golovko, George
Nia, Anna
Evangelista, Lorraine
Fofanov, Yuriy
author_facet Khanipov, Kamil
Golovko, George
Nia, Anna
Evangelista, Lorraine
Fofanov, Yuriy
author_sort Khanipov, Kamil
collection PubMed
description OBJECTIVES/GOALS: Identify the interactions between nasopharyngeal bacterial pathogens, commensals, and patient clinical characteristics in relation to the development of viral upper respiratory tract infections (URI) and acute otitis media (AOM) in infants. METHODS/STUDY POPULATION: The subjects were part of a prospective, longitudinal study (2008–2014) of infants to evaluate the prevalence and risks for the development of URI and AOM. Healthy infants (n = 362) were enrolled from near birth and followed to the first episode of AOM up to 12 months of age. Nasopharyngeal specimens and clinical traits were collected at monthly intervals between 1-6 months, month 9, and during viral URI episodes. Subjects were closely followed for AOM development. 16S rRNA sequencing was performed on the nasopharyngeal swabs to identify their bacterial composition. Multidimensional (2, 3, and 4 dimensional) co-presence, co-exclusion, and one-way relation patterns were identified between the microbiome compositions, health status, and other collected clinical traits. RESULTS/ANTICIPATED RESULTS: We analyzed 971 specimens collected monthly and during URI and AOM episodes from 139 infants. Of the 139 enrolled subjects, 96% had 2 or more healthy samples, 77% contracted URI/AOM during the study period, and 60% had at least 1 healthy sample before URI/AOM onset. Otopathogens (Moraxella, Haemophilus, and Streptococcus), Staphylococcus, and Pseudomonas were the most common pathogenic genera. Corynebacterium, Dolosigranulum, and Acinetobacter were 3 most abundant commensal bacterial genera. Samples from infants with AOM in the first year had a significantly higher relative abundance of Haemophilus, Enterobacter, and Yersinia, and lower relative abundance of Corynebacterium, and Pseudomonas compared to samples from infants who did not develop AOM. DISCUSSION/SIGNIFICANCE OF IMPACT: Identification of complex multidimensional interaction patterns within microbial communities and environmental factors is vital to understanding disease onset risk and prevention. Prophylactic microbiome and environmental factor modulation between enterotypes could be used to reduce URI/AOM onset in infants.
format Online
Article
Text
id pubmed-8822968
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Cambridge University Press
record_format MEDLINE/PubMed
spelling pubmed-88229682022-02-18 4471 Interactions of the Infant Nasopharyngeal Microbiota and Subjects’ Clinical Traits in Development of Viral Upper Respiratory Tract Infections and Acute Otitis Media Khanipov, Kamil Golovko, George Nia, Anna Evangelista, Lorraine Fofanov, Yuriy J Clin Transl Sci Data Science/Biostatistics/Informatics OBJECTIVES/GOALS: Identify the interactions between nasopharyngeal bacterial pathogens, commensals, and patient clinical characteristics in relation to the development of viral upper respiratory tract infections (URI) and acute otitis media (AOM) in infants. METHODS/STUDY POPULATION: The subjects were part of a prospective, longitudinal study (2008–2014) of infants to evaluate the prevalence and risks for the development of URI and AOM. Healthy infants (n = 362) were enrolled from near birth and followed to the first episode of AOM up to 12 months of age. Nasopharyngeal specimens and clinical traits were collected at monthly intervals between 1-6 months, month 9, and during viral URI episodes. Subjects were closely followed for AOM development. 16S rRNA sequencing was performed on the nasopharyngeal swabs to identify their bacterial composition. Multidimensional (2, 3, and 4 dimensional) co-presence, co-exclusion, and one-way relation patterns were identified between the microbiome compositions, health status, and other collected clinical traits. RESULTS/ANTICIPATED RESULTS: We analyzed 971 specimens collected monthly and during URI and AOM episodes from 139 infants. Of the 139 enrolled subjects, 96% had 2 or more healthy samples, 77% contracted URI/AOM during the study period, and 60% had at least 1 healthy sample before URI/AOM onset. Otopathogens (Moraxella, Haemophilus, and Streptococcus), Staphylococcus, and Pseudomonas were the most common pathogenic genera. Corynebacterium, Dolosigranulum, and Acinetobacter were 3 most abundant commensal bacterial genera. Samples from infants with AOM in the first year had a significantly higher relative abundance of Haemophilus, Enterobacter, and Yersinia, and lower relative abundance of Corynebacterium, and Pseudomonas compared to samples from infants who did not develop AOM. DISCUSSION/SIGNIFICANCE OF IMPACT: Identification of complex multidimensional interaction patterns within microbial communities and environmental factors is vital to understanding disease onset risk and prevention. Prophylactic microbiome and environmental factor modulation between enterotypes could be used to reduce URI/AOM onset in infants. Cambridge University Press 2020-07-29 /pmc/articles/PMC8822968/ http://dx.doi.org/10.1017/cts.2020.179 Text en © The Association for Clinical and Translational Science 2020 https://creativecommons.org/licenses/by/4.0/This is an Open Access article, distributed under the terms of the Creative Commons Attribution licence (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted re-use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Data Science/Biostatistics/Informatics
Khanipov, Kamil
Golovko, George
Nia, Anna
Evangelista, Lorraine
Fofanov, Yuriy
4471 Interactions of the Infant Nasopharyngeal Microbiota and Subjects’ Clinical Traits in Development of Viral Upper Respiratory Tract Infections and Acute Otitis Media
title 4471 Interactions of the Infant Nasopharyngeal Microbiota and Subjects’ Clinical Traits in Development of Viral Upper Respiratory Tract Infections and Acute Otitis Media
title_full 4471 Interactions of the Infant Nasopharyngeal Microbiota and Subjects’ Clinical Traits in Development of Viral Upper Respiratory Tract Infections and Acute Otitis Media
title_fullStr 4471 Interactions of the Infant Nasopharyngeal Microbiota and Subjects’ Clinical Traits in Development of Viral Upper Respiratory Tract Infections and Acute Otitis Media
title_full_unstemmed 4471 Interactions of the Infant Nasopharyngeal Microbiota and Subjects’ Clinical Traits in Development of Viral Upper Respiratory Tract Infections and Acute Otitis Media
title_short 4471 Interactions of the Infant Nasopharyngeal Microbiota and Subjects’ Clinical Traits in Development of Viral Upper Respiratory Tract Infections and Acute Otitis Media
title_sort 4471 interactions of the infant nasopharyngeal microbiota and subjects’ clinical traits in development of viral upper respiratory tract infections and acute otitis media
topic Data Science/Biostatistics/Informatics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8822968/
http://dx.doi.org/10.1017/cts.2020.179
work_keys_str_mv AT khanipovkamil 4471interactionsoftheinfantnasopharyngealmicrobiotaandsubjectsclinicaltraitsindevelopmentofviralupperrespiratorytractinfectionsandacuteotitismedia
AT golovkogeorge 4471interactionsoftheinfantnasopharyngealmicrobiotaandsubjectsclinicaltraitsindevelopmentofviralupperrespiratorytractinfectionsandacuteotitismedia
AT niaanna 4471interactionsoftheinfantnasopharyngealmicrobiotaandsubjectsclinicaltraitsindevelopmentofviralupperrespiratorytractinfectionsandacuteotitismedia
AT evangelistalorraine 4471interactionsoftheinfantnasopharyngealmicrobiotaandsubjectsclinicaltraitsindevelopmentofviralupperrespiratorytractinfectionsandacuteotitismedia
AT fofanovyuriy 4471interactionsoftheinfantnasopharyngealmicrobiotaandsubjectsclinicaltraitsindevelopmentofviralupperrespiratorytractinfectionsandacuteotitismedia