Cargando…
4483 Activity and Abundance of Mucus-degrading Microbes in Inflammatory Bowel Disease
OBJECTIVES/GOALS: This study seeks to culture and characterize mucus-degrading microbes from the microbiome of inflammatory bowel disease (IBD) patients. METHODS/STUDY POPULATION: Stool will be collected from IBD patients and healthy first-degree relatives, then enriched for mucin-degrading microbes...
Autores principales: | , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Cambridge University Press
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8823595/ http://dx.doi.org/10.1017/cts.2020.288 |
_version_ | 1784646835448578048 |
---|---|
author | Ostrowski, Matthew Martens, Eric C. |
author_facet | Ostrowski, Matthew Martens, Eric C. |
author_sort | Ostrowski, Matthew |
collection | PubMed |
description | OBJECTIVES/GOALS: This study seeks to culture and characterize mucus-degrading microbes from the microbiome of inflammatory bowel disease (IBD) patients. METHODS/STUDY POPULATION: Stool will be collected from IBD patients and healthy first-degree relatives, then enriched for mucin-degrading microbes through growth on porcine rectal mucin. Dilution plating in both liquid and solid culture formats will be employed to isolate strains capable of growth on mucin. Cultures that are positive for mucin degradation will be identified with 16S rRNA sequencing; unique isolates will be genome sequenced and transcriptionally profiled on simple monosaccharides and mucin in order to identify putative mucin-degrading genes. The abundance of novel enzymes, pathways, and microbes will be compared in healthy and IBD patient populations using existing datasets in the literature. RESULTS/ANTICIPATED RESULTS: We expect to isolate previously uncultured mucin-degrading microbes, which will likely include new strains and possibly new species of bacteria. Through the transcriptomic characterization of mucin-degrading pathways, we will expand the lexicon of known mucin-degrading enzymes and pathways used by bacteria in the human colon. We expect mucin-degrading microbes to be more abundant and active in IBD patients compared to healthy controls. DISCUSSION/SIGNIFICANCE OF IMPACT: There is no cure for IBD and treatment relies heavily on suppressing a patient’s immune system. This research seeks to understand the contribution of the gut microbiota in the pathogenesis of IBD, which may lead to future therapeutic targets. |
format | Online Article Text |
id | pubmed-8823595 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Cambridge University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-88235952022-02-18 4483 Activity and Abundance of Mucus-degrading Microbes in Inflammatory Bowel Disease Ostrowski, Matthew Martens, Eric C. J Clin Transl Sci Mechanistic Basic to Clinical OBJECTIVES/GOALS: This study seeks to culture and characterize mucus-degrading microbes from the microbiome of inflammatory bowel disease (IBD) patients. METHODS/STUDY POPULATION: Stool will be collected from IBD patients and healthy first-degree relatives, then enriched for mucin-degrading microbes through growth on porcine rectal mucin. Dilution plating in both liquid and solid culture formats will be employed to isolate strains capable of growth on mucin. Cultures that are positive for mucin degradation will be identified with 16S rRNA sequencing; unique isolates will be genome sequenced and transcriptionally profiled on simple monosaccharides and mucin in order to identify putative mucin-degrading genes. The abundance of novel enzymes, pathways, and microbes will be compared in healthy and IBD patient populations using existing datasets in the literature. RESULTS/ANTICIPATED RESULTS: We expect to isolate previously uncultured mucin-degrading microbes, which will likely include new strains and possibly new species of bacteria. Through the transcriptomic characterization of mucin-degrading pathways, we will expand the lexicon of known mucin-degrading enzymes and pathways used by bacteria in the human colon. We expect mucin-degrading microbes to be more abundant and active in IBD patients compared to healthy controls. DISCUSSION/SIGNIFICANCE OF IMPACT: There is no cure for IBD and treatment relies heavily on suppressing a patient’s immune system. This research seeks to understand the contribution of the gut microbiota in the pathogenesis of IBD, which may lead to future therapeutic targets. Cambridge University Press 2020-07-29 /pmc/articles/PMC8823595/ http://dx.doi.org/10.1017/cts.2020.288 Text en © The Association for Clinical and Translational Science 2020 https://creativecommons.org/licenses/by/4.0/This is an Open Access article, distributed under the terms of the Creative Commons Attribution licence (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted re-use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mechanistic Basic to Clinical Ostrowski, Matthew Martens, Eric C. 4483 Activity and Abundance of Mucus-degrading Microbes in Inflammatory Bowel Disease |
title | 4483 Activity and Abundance of Mucus-degrading Microbes in Inflammatory Bowel Disease |
title_full | 4483 Activity and Abundance of Mucus-degrading Microbes in Inflammatory Bowel Disease |
title_fullStr | 4483 Activity and Abundance of Mucus-degrading Microbes in Inflammatory Bowel Disease |
title_full_unstemmed | 4483 Activity and Abundance of Mucus-degrading Microbes in Inflammatory Bowel Disease |
title_short | 4483 Activity and Abundance of Mucus-degrading Microbes in Inflammatory Bowel Disease |
title_sort | 4483 activity and abundance of mucus-degrading microbes in inflammatory bowel disease |
topic | Mechanistic Basic to Clinical |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8823595/ http://dx.doi.org/10.1017/cts.2020.288 |
work_keys_str_mv | AT ostrowskimatthew 4483activityandabundanceofmucusdegradingmicrobesininflammatoryboweldisease AT martensericc 4483activityandabundanceofmucusdegradingmicrobesininflammatoryboweldisease |