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MOCA: a systematic toolbox for designing and assessing modular functional near-infrared brain imaging probes
SIGNIFICANCE: The expansion of functional near-infrared spectroscopy (fNIRS) systems toward broader utilities has led to the emergence of modular fNIRS systems composed of repeating optical source/detector modules. Compared to conventional fNIRS systems, modular fNIRS systems are more compact and fl...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Society of Photo-Optical Instrumentation Engineers
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8823693/ https://www.ncbi.nlm.nih.gov/pubmed/36278785 http://dx.doi.org/10.1117/1.NPh.9.1.017801 |
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author | Vanegas, Morris Mireles, Miguel Fang, Qianqian |
author_facet | Vanegas, Morris Mireles, Miguel Fang, Qianqian |
author_sort | Vanegas, Morris |
collection | PubMed |
description | SIGNIFICANCE: The expansion of functional near-infrared spectroscopy (fNIRS) systems toward broader utilities has led to the emergence of modular fNIRS systems composed of repeating optical source/detector modules. Compared to conventional fNIRS systems, modular fNIRS systems are more compact and flexible, making wearable and long-term monitoring possible. However, the large number of design parameters makes understanding their impact on a probe’s performance a daunting task. AIM: We aim to create a systematic software platform to facilitate the design, characterization, and comparison of modular fNIRS probes. APPROACH: Our software—modular optode configuration analyzer (MOCA)—implements semi-automatic algorithms that assist in tessellating user-specified regions-of-interest, in interconnecting modules of various shapes, and in quantitatively comparing probe performance using metrics, such as spatial channel distributions and average brain sensitivity of the resulting probes. There is also support for limited parameter sweeping capabilities. RESULTS: Through several examples, we show that users can use MOCA to design and optimize modular fNIRS probes, study trade-offs between several module shapes, improve brain sensitivity in probes via module re-orientation, and enhance probe performance via adjusting module spatial layouts. CONCLUSION: Despite its simplicity, our modular probe design platform offers a framework to describe and quantitatively assess probes made by modules, opening a new door for the growing fNIRS user community to approach the challenging problem of module- and probe-parameter selection and fine-tuning. |
format | Online Article Text |
id | pubmed-8823693 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Society of Photo-Optical Instrumentation Engineers |
record_format | MEDLINE/PubMed |
spelling | pubmed-88236932022-02-09 MOCA: a systematic toolbox for designing and assessing modular functional near-infrared brain imaging probes Vanegas, Morris Mireles, Miguel Fang, Qianqian Neurophotonics Tutorials SIGNIFICANCE: The expansion of functional near-infrared spectroscopy (fNIRS) systems toward broader utilities has led to the emergence of modular fNIRS systems composed of repeating optical source/detector modules. Compared to conventional fNIRS systems, modular fNIRS systems are more compact and flexible, making wearable and long-term monitoring possible. However, the large number of design parameters makes understanding their impact on a probe’s performance a daunting task. AIM: We aim to create a systematic software platform to facilitate the design, characterization, and comparison of modular fNIRS probes. APPROACH: Our software—modular optode configuration analyzer (MOCA)—implements semi-automatic algorithms that assist in tessellating user-specified regions-of-interest, in interconnecting modules of various shapes, and in quantitatively comparing probe performance using metrics, such as spatial channel distributions and average brain sensitivity of the resulting probes. There is also support for limited parameter sweeping capabilities. RESULTS: Through several examples, we show that users can use MOCA to design and optimize modular fNIRS probes, study trade-offs between several module shapes, improve brain sensitivity in probes via module re-orientation, and enhance probe performance via adjusting module spatial layouts. CONCLUSION: Despite its simplicity, our modular probe design platform offers a framework to describe and quantitatively assess probes made by modules, opening a new door for the growing fNIRS user community to approach the challenging problem of module- and probe-parameter selection and fine-tuning. Society of Photo-Optical Instrumentation Engineers 2022-02-08 2022-01 /pmc/articles/PMC8823693/ /pubmed/36278785 http://dx.doi.org/10.1117/1.NPh.9.1.017801 Text en © 2022 The Authors https://creativecommons.org/licenses/by/4.0/Published by SPIE under a Creative Commons Attribution 4.0 International License. Distribution or reproduction of this work in whole or in part requires full attribution of the original publication, including its DOI. |
spellingShingle | Tutorials Vanegas, Morris Mireles, Miguel Fang, Qianqian MOCA: a systematic toolbox for designing and assessing modular functional near-infrared brain imaging probes |
title | MOCA: a systematic toolbox for designing and assessing modular functional near-infrared brain imaging probes |
title_full | MOCA: a systematic toolbox for designing and assessing modular functional near-infrared brain imaging probes |
title_fullStr | MOCA: a systematic toolbox for designing and assessing modular functional near-infrared brain imaging probes |
title_full_unstemmed | MOCA: a systematic toolbox for designing and assessing modular functional near-infrared brain imaging probes |
title_short | MOCA: a systematic toolbox for designing and assessing modular functional near-infrared brain imaging probes |
title_sort | moca: a systematic toolbox for designing and assessing modular functional near-infrared brain imaging probes |
topic | Tutorials |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8823693/ https://www.ncbi.nlm.nih.gov/pubmed/36278785 http://dx.doi.org/10.1117/1.NPh.9.1.017801 |
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