Cargando…

Protein Phosphatase 1 Regulatory Subunit 3: A Prognostic Biomarker in Stomach Adenocarcinoma

PURPOSE: This study aimed to determine the potential application of the protein phosphatase 1 regulatory subunit 3 (PPP1R3B) gene as a prognostic marker in stomach adenocarcinoma (STAD), as well as its potential mediating biological processes and pathways. MATERIALS AND METHODS: Differential express...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhu, Ya-Zhen, Liao, Xi-Wen, Yin, Wu, Wei, Hai-Ming
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Dove 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8824296/
https://www.ncbi.nlm.nih.gov/pubmed/35153505
http://dx.doi.org/10.2147/IJGM.S345978
_version_ 1784646984495267840
author Zhu, Ya-Zhen
Liao, Xi-Wen
Yin, Wu
Wei, Hai-Ming
author_facet Zhu, Ya-Zhen
Liao, Xi-Wen
Yin, Wu
Wei, Hai-Ming
author_sort Zhu, Ya-Zhen
collection PubMed
description PURPOSE: This study aimed to determine the potential application of the protein phosphatase 1 regulatory subunit 3 (PPP1R3B) gene as a prognostic marker in stomach adenocarcinoma (STAD), as well as its potential mediating biological processes and pathways. MATERIALS AND METHODS: Differential expression analyses were performed using the TIMER2.0 and UALCAN databases. Complete RNA-seq data and other relevant clinical and survival data were acquired from The Cancer Genome Atlas (TCGA). Univariate survival analyses, Cox regression modelling, and Kaplan–Meier curves were implemented to investigate the associations between PPP1R3B gene expression and clinical pathologic features. A genome wide gene set enrichment analysis (GSEA) was conducted to define the underlying molecular mechanisms mediating the observed associations between the PPP1R3B gene and STAD development. RESULTS: We found that PPP1R3B was overexpressed in STAD tissues, and that higher PPP1R3B expression correlated with worse prognoses in patients with STAD. Comprehensive survival analyses suggested that PPP1R3B might be an independent predictive factor for survival time in patients with STAD. The prognostic relationship between PPP1R3B and STAD was also verified using Kaplan–Meier curves. Patients with higher PPP1R3B levels had a shorter clinical survival time on average. Additionally, a GSEA demonstrated that PPP1R3B might be involved in multiple biological processes and pathways. CONCLUSION: Our findings demonstrate that the PPP1R3B gene has utility as a potential molecular marker for STAD prognoses.
format Online
Article
Text
id pubmed-8824296
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Dove
record_format MEDLINE/PubMed
spelling pubmed-88242962022-02-10 Protein Phosphatase 1 Regulatory Subunit 3: A Prognostic Biomarker in Stomach Adenocarcinoma Zhu, Ya-Zhen Liao, Xi-Wen Yin, Wu Wei, Hai-Ming Int J Gen Med Original Research PURPOSE: This study aimed to determine the potential application of the protein phosphatase 1 regulatory subunit 3 (PPP1R3B) gene as a prognostic marker in stomach adenocarcinoma (STAD), as well as its potential mediating biological processes and pathways. MATERIALS AND METHODS: Differential expression analyses were performed using the TIMER2.0 and UALCAN databases. Complete RNA-seq data and other relevant clinical and survival data were acquired from The Cancer Genome Atlas (TCGA). Univariate survival analyses, Cox regression modelling, and Kaplan–Meier curves were implemented to investigate the associations between PPP1R3B gene expression and clinical pathologic features. A genome wide gene set enrichment analysis (GSEA) was conducted to define the underlying molecular mechanisms mediating the observed associations between the PPP1R3B gene and STAD development. RESULTS: We found that PPP1R3B was overexpressed in STAD tissues, and that higher PPP1R3B expression correlated with worse prognoses in patients with STAD. Comprehensive survival analyses suggested that PPP1R3B might be an independent predictive factor for survival time in patients with STAD. The prognostic relationship between PPP1R3B and STAD was also verified using Kaplan–Meier curves. Patients with higher PPP1R3B levels had a shorter clinical survival time on average. Additionally, a GSEA demonstrated that PPP1R3B might be involved in multiple biological processes and pathways. CONCLUSION: Our findings demonstrate that the PPP1R3B gene has utility as a potential molecular marker for STAD prognoses. Dove 2022-02-04 /pmc/articles/PMC8824296/ /pubmed/35153505 http://dx.doi.org/10.2147/IJGM.S345978 Text en © 2022 Zhu et al. https://creativecommons.org/licenses/by-nc/3.0/This work is published and licensed by Dove Medical Press Limited. The full terms of this license are available at https://www.dovepress.com/terms.php and incorporate the Creative Commons Attribution – Non Commercial (unported, v3.0) License (http://creativecommons.org/licenses/by-nc/3.0/ (https://creativecommons.org/licenses/by-nc/3.0/) ). By accessing the work you hereby accept the Terms. Non-commercial uses of the work are permitted without any further permission from Dove Medical Press Limited, provided the work is properly attributed. For permission for commercial use of this work, please see paragraphs 4.2 and 5 of our Terms (https://www.dovepress.com/terms.php).
spellingShingle Original Research
Zhu, Ya-Zhen
Liao, Xi-Wen
Yin, Wu
Wei, Hai-Ming
Protein Phosphatase 1 Regulatory Subunit 3: A Prognostic Biomarker in Stomach Adenocarcinoma
title Protein Phosphatase 1 Regulatory Subunit 3: A Prognostic Biomarker in Stomach Adenocarcinoma
title_full Protein Phosphatase 1 Regulatory Subunit 3: A Prognostic Biomarker in Stomach Adenocarcinoma
title_fullStr Protein Phosphatase 1 Regulatory Subunit 3: A Prognostic Biomarker in Stomach Adenocarcinoma
title_full_unstemmed Protein Phosphatase 1 Regulatory Subunit 3: A Prognostic Biomarker in Stomach Adenocarcinoma
title_short Protein Phosphatase 1 Regulatory Subunit 3: A Prognostic Biomarker in Stomach Adenocarcinoma
title_sort protein phosphatase 1 regulatory subunit 3: a prognostic biomarker in stomach adenocarcinoma
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8824296/
https://www.ncbi.nlm.nih.gov/pubmed/35153505
http://dx.doi.org/10.2147/IJGM.S345978
work_keys_str_mv AT zhuyazhen proteinphosphatase1regulatorysubunit3aprognosticbiomarkerinstomachadenocarcinoma
AT liaoxiwen proteinphosphatase1regulatorysubunit3aprognosticbiomarkerinstomachadenocarcinoma
AT yinwu proteinphosphatase1regulatorysubunit3aprognosticbiomarkerinstomachadenocarcinoma
AT weihaiming proteinphosphatase1regulatorysubunit3aprognosticbiomarkerinstomachadenocarcinoma