Cargando…

A novel algorithm for diagnosis of invasive pulmonary aspergillosis based on pentraxin 3 gene polymorphisms and its adjusted value among autoimmune diseases patients

BACKGROUND: Invasive pulmonary aspergillosis (IPA) is a rapidly progressive and fatal disease for those with autoimmune diseases. The performance of existing diagnostic tools is unsatisfactory, and a novel algorithm based on pentraxin 3 (PTX3) gene polymorphisms with adjusted PTX3 and galactomannan...

Descripción completa

Detalles Bibliográficos
Autores principales: Yu, Yuetian, Liu, Chunyan, Zhu, Cheng, Zhong, Han, Gu, Zhichun, Xu, Chunhui, Pan, Chun, Xu, Zhijun, Wu, Zhixiong, Wu, Wenjuan, Lu, Liangjing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: AME Publishing Company 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8825557/
https://www.ncbi.nlm.nih.gov/pubmed/35242862
http://dx.doi.org/10.21037/atm-21-4017
_version_ 1784647240879439872
author Yu, Yuetian
Liu, Chunyan
Zhu, Cheng
Zhong, Han
Gu, Zhichun
Xu, Chunhui
Pan, Chun
Xu, Zhijun
Wu, Zhixiong
Wu, Wenjuan
Lu, Liangjing
author_facet Yu, Yuetian
Liu, Chunyan
Zhu, Cheng
Zhong, Han
Gu, Zhichun
Xu, Chunhui
Pan, Chun
Xu, Zhijun
Wu, Zhixiong
Wu, Wenjuan
Lu, Liangjing
author_sort Yu, Yuetian
collection PubMed
description BACKGROUND: Invasive pulmonary aspergillosis (IPA) is a rapidly progressive and fatal disease for those with autoimmune diseases. The performance of existing diagnostic tools is unsatisfactory, and a novel algorithm based on pentraxin 3 (PTX3) gene polymorphisms with adjusted PTX3 and galactomannan (GM) values is urgently needed. METHODS: Levels of PTX3 and GM were measured in the bronchoalveolar lavage fluid (BALF) and blood samples of patients who had autoimmune diseases with IPA between June 2017 and June 2021. Urea dilution was applied internally to correct the real BALF PTX3 and GM values. Three single-nucleotide polymorphisms (SNPs; rs1840680, rs2305619, and rs3816527) in the PTX3 gene were detected by polymerase chain reaction direct sequencing, and their associations with IPA were evaluated. Receiver operating characteristic (ROC) curves based on different variables were generated to determine the best algorithm for IPA diagnosis. RESULTS: This study enrolled 50 patients with IPA and 100 without IPA in the control groups (comprising 50 patients with Aspergillus airway colonization and 50 patients with bacterial pneumonia). The levels of adjusted BALF PTX3 and GM were higher in the IPA group than in the control groups (P<0.05, respectively). For diagnosing IPA, the best adjusted cutoff value for PTX in BALF was 14.5 ng/mL and the best adjusted cutoff value for GM in BALF was 2.5 optical density index (ODI). The SNP rs1840680 AA homozygote was associated with a higher risk of IPA [odds ratio (OR) 18.86, 95% confidence interval (CI): 7.96–44.69; P<0.01], while no genotypic distribution differences were observed for the other 2 SNPs (rs2305619 and rs3816527). Six algorithms were established based on PTX3 gene polymorphisms. The algorithm consisting of PTX3 gene polymorphisms with adjusted BALF PTX3 and BALF GM values demonstrated the best diagnostic performance (sensitivity 90.03%; specificity 97.09%; area under the curve 0.94). CONCLUSIONS: It was revealed that our new algorithm based on PTX3 gene polymorphisms combined with adjusted BALF GM and BALF PTX3 values performed well in diagnosing IPA.
format Online
Article
Text
id pubmed-8825557
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher AME Publishing Company
record_format MEDLINE/PubMed
spelling pubmed-88255572022-03-02 A novel algorithm for diagnosis of invasive pulmonary aspergillosis based on pentraxin 3 gene polymorphisms and its adjusted value among autoimmune diseases patients Yu, Yuetian Liu, Chunyan Zhu, Cheng Zhong, Han Gu, Zhichun Xu, Chunhui Pan, Chun Xu, Zhijun Wu, Zhixiong Wu, Wenjuan Lu, Liangjing Ann Transl Med Original Article BACKGROUND: Invasive pulmonary aspergillosis (IPA) is a rapidly progressive and fatal disease for those with autoimmune diseases. The performance of existing diagnostic tools is unsatisfactory, and a novel algorithm based on pentraxin 3 (PTX3) gene polymorphisms with adjusted PTX3 and galactomannan (GM) values is urgently needed. METHODS: Levels of PTX3 and GM were measured in the bronchoalveolar lavage fluid (BALF) and blood samples of patients who had autoimmune diseases with IPA between June 2017 and June 2021. Urea dilution was applied internally to correct the real BALF PTX3 and GM values. Three single-nucleotide polymorphisms (SNPs; rs1840680, rs2305619, and rs3816527) in the PTX3 gene were detected by polymerase chain reaction direct sequencing, and their associations with IPA were evaluated. Receiver operating characteristic (ROC) curves based on different variables were generated to determine the best algorithm for IPA diagnosis. RESULTS: This study enrolled 50 patients with IPA and 100 without IPA in the control groups (comprising 50 patients with Aspergillus airway colonization and 50 patients with bacterial pneumonia). The levels of adjusted BALF PTX3 and GM were higher in the IPA group than in the control groups (P<0.05, respectively). For diagnosing IPA, the best adjusted cutoff value for PTX in BALF was 14.5 ng/mL and the best adjusted cutoff value for GM in BALF was 2.5 optical density index (ODI). The SNP rs1840680 AA homozygote was associated with a higher risk of IPA [odds ratio (OR) 18.86, 95% confidence interval (CI): 7.96–44.69; P<0.01], while no genotypic distribution differences were observed for the other 2 SNPs (rs2305619 and rs3816527). Six algorithms were established based on PTX3 gene polymorphisms. The algorithm consisting of PTX3 gene polymorphisms with adjusted BALF PTX3 and BALF GM values demonstrated the best diagnostic performance (sensitivity 90.03%; specificity 97.09%; area under the curve 0.94). CONCLUSIONS: It was revealed that our new algorithm based on PTX3 gene polymorphisms combined with adjusted BALF GM and BALF PTX3 values performed well in diagnosing IPA. AME Publishing Company 2022-01 /pmc/articles/PMC8825557/ /pubmed/35242862 http://dx.doi.org/10.21037/atm-21-4017 Text en 2022 Annals of Translational Medicine. All rights reserved. https://creativecommons.org/licenses/by-nc-nd/4.0/Open Access Statement: This is an Open Access article distributed in accordance with the Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International License (CC BY-NC-ND 4.0), which permits the non-commercial replication and distribution of the article with the strict proviso that no changes or edits are made and the original work is properly cited (including links to both the formal publication through the relevant DOI and the license). See: https://creativecommons.org/licenses/by-nc-nd/4.0 (https://creativecommons.org/licenses/by-nc-nd/4.0/) .
spellingShingle Original Article
Yu, Yuetian
Liu, Chunyan
Zhu, Cheng
Zhong, Han
Gu, Zhichun
Xu, Chunhui
Pan, Chun
Xu, Zhijun
Wu, Zhixiong
Wu, Wenjuan
Lu, Liangjing
A novel algorithm for diagnosis of invasive pulmonary aspergillosis based on pentraxin 3 gene polymorphisms and its adjusted value among autoimmune diseases patients
title A novel algorithm for diagnosis of invasive pulmonary aspergillosis based on pentraxin 3 gene polymorphisms and its adjusted value among autoimmune diseases patients
title_full A novel algorithm for diagnosis of invasive pulmonary aspergillosis based on pentraxin 3 gene polymorphisms and its adjusted value among autoimmune diseases patients
title_fullStr A novel algorithm for diagnosis of invasive pulmonary aspergillosis based on pentraxin 3 gene polymorphisms and its adjusted value among autoimmune diseases patients
title_full_unstemmed A novel algorithm for diagnosis of invasive pulmonary aspergillosis based on pentraxin 3 gene polymorphisms and its adjusted value among autoimmune diseases patients
title_short A novel algorithm for diagnosis of invasive pulmonary aspergillosis based on pentraxin 3 gene polymorphisms and its adjusted value among autoimmune diseases patients
title_sort novel algorithm for diagnosis of invasive pulmonary aspergillosis based on pentraxin 3 gene polymorphisms and its adjusted value among autoimmune diseases patients
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8825557/
https://www.ncbi.nlm.nih.gov/pubmed/35242862
http://dx.doi.org/10.21037/atm-21-4017
work_keys_str_mv AT yuyuetian anovelalgorithmfordiagnosisofinvasivepulmonaryaspergillosisbasedonpentraxin3genepolymorphismsanditsadjustedvalueamongautoimmunediseasespatients
AT liuchunyan anovelalgorithmfordiagnosisofinvasivepulmonaryaspergillosisbasedonpentraxin3genepolymorphismsanditsadjustedvalueamongautoimmunediseasespatients
AT zhucheng anovelalgorithmfordiagnosisofinvasivepulmonaryaspergillosisbasedonpentraxin3genepolymorphismsanditsadjustedvalueamongautoimmunediseasespatients
AT zhonghan anovelalgorithmfordiagnosisofinvasivepulmonaryaspergillosisbasedonpentraxin3genepolymorphismsanditsadjustedvalueamongautoimmunediseasespatients
AT guzhichun anovelalgorithmfordiagnosisofinvasivepulmonaryaspergillosisbasedonpentraxin3genepolymorphismsanditsadjustedvalueamongautoimmunediseasespatients
AT xuchunhui anovelalgorithmfordiagnosisofinvasivepulmonaryaspergillosisbasedonpentraxin3genepolymorphismsanditsadjustedvalueamongautoimmunediseasespatients
AT panchun anovelalgorithmfordiagnosisofinvasivepulmonaryaspergillosisbasedonpentraxin3genepolymorphismsanditsadjustedvalueamongautoimmunediseasespatients
AT xuzhijun anovelalgorithmfordiagnosisofinvasivepulmonaryaspergillosisbasedonpentraxin3genepolymorphismsanditsadjustedvalueamongautoimmunediseasespatients
AT wuzhixiong anovelalgorithmfordiagnosisofinvasivepulmonaryaspergillosisbasedonpentraxin3genepolymorphismsanditsadjustedvalueamongautoimmunediseasespatients
AT wuwenjuan anovelalgorithmfordiagnosisofinvasivepulmonaryaspergillosisbasedonpentraxin3genepolymorphismsanditsadjustedvalueamongautoimmunediseasespatients
AT luliangjing anovelalgorithmfordiagnosisofinvasivepulmonaryaspergillosisbasedonpentraxin3genepolymorphismsanditsadjustedvalueamongautoimmunediseasespatients
AT yuyuetian novelalgorithmfordiagnosisofinvasivepulmonaryaspergillosisbasedonpentraxin3genepolymorphismsanditsadjustedvalueamongautoimmunediseasespatients
AT liuchunyan novelalgorithmfordiagnosisofinvasivepulmonaryaspergillosisbasedonpentraxin3genepolymorphismsanditsadjustedvalueamongautoimmunediseasespatients
AT zhucheng novelalgorithmfordiagnosisofinvasivepulmonaryaspergillosisbasedonpentraxin3genepolymorphismsanditsadjustedvalueamongautoimmunediseasespatients
AT zhonghan novelalgorithmfordiagnosisofinvasivepulmonaryaspergillosisbasedonpentraxin3genepolymorphismsanditsadjustedvalueamongautoimmunediseasespatients
AT guzhichun novelalgorithmfordiagnosisofinvasivepulmonaryaspergillosisbasedonpentraxin3genepolymorphismsanditsadjustedvalueamongautoimmunediseasespatients
AT xuchunhui novelalgorithmfordiagnosisofinvasivepulmonaryaspergillosisbasedonpentraxin3genepolymorphismsanditsadjustedvalueamongautoimmunediseasespatients
AT panchun novelalgorithmfordiagnosisofinvasivepulmonaryaspergillosisbasedonpentraxin3genepolymorphismsanditsadjustedvalueamongautoimmunediseasespatients
AT xuzhijun novelalgorithmfordiagnosisofinvasivepulmonaryaspergillosisbasedonpentraxin3genepolymorphismsanditsadjustedvalueamongautoimmunediseasespatients
AT wuzhixiong novelalgorithmfordiagnosisofinvasivepulmonaryaspergillosisbasedonpentraxin3genepolymorphismsanditsadjustedvalueamongautoimmunediseasespatients
AT wuwenjuan novelalgorithmfordiagnosisofinvasivepulmonaryaspergillosisbasedonpentraxin3genepolymorphismsanditsadjustedvalueamongautoimmunediseasespatients
AT luliangjing novelalgorithmfordiagnosisofinvasivepulmonaryaspergillosisbasedonpentraxin3genepolymorphismsanditsadjustedvalueamongautoimmunediseasespatients