Cargando…

Comprehensive and Integrative Analysis of Two Novel SARS-CoV-2 Entry Associated Proteases CTSB and CTSL in Healthy Individuals and Cancer Patients

More than 200 million people have been infected with severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and 4 million deaths have been reported worldwide to date. Cathepsin B/cathepsin L (CTSB/L) are SARS-CoV-2 entry–associated proteases and facilitate SARS-CoV-2 to infect host cells. Howe...

Descripción completa

Detalles Bibliográficos
Autores principales: Huang, Yongbiao, Li, Shiyu, Huang, Shanshan, Tu, Jingyao, Chen, Xinyi, Xiao, Lingyan, Liu, Bo, Yuan, Xianglin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8826559/
https://www.ncbi.nlm.nih.gov/pubmed/35155389
http://dx.doi.org/10.3389/fbioe.2022.780751
_version_ 1784647452518776832
author Huang, Yongbiao
Li, Shiyu
Huang, Shanshan
Tu, Jingyao
Chen, Xinyi
Xiao, Lingyan
Liu, Bo
Yuan, Xianglin
author_facet Huang, Yongbiao
Li, Shiyu
Huang, Shanshan
Tu, Jingyao
Chen, Xinyi
Xiao, Lingyan
Liu, Bo
Yuan, Xianglin
author_sort Huang, Yongbiao
collection PubMed
description More than 200 million people have been infected with severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and 4 million deaths have been reported worldwide to date. Cathepsin B/cathepsin L (CTSB/L) are SARS-CoV-2 entry–associated proteases and facilitate SARS-CoV-2 to infect host cells. However, the expressions of CTSB/L in healthy individuals and cancer patients remain not fully elucidated yet. Here, we comprehensively profiled the expressions and distributions of CTSB/L in human normal tissues, cancer tissues, and cell lines. Moreover, we compared CTSB/L expressions between various cancers and matched normal tissues, and investigated their genetic alteration and prognostic values in pan-cancer. Finally, we also explored the correlation between CTSB/L expressions and immune infiltration. We found that CTSB was highly expressed in most tissues, and CTSL was highly expressed predominantly in the digestive, urinary, and respiratory systems, such as the lungs, liver and gallbladder, and kidney tissues in the translational level. Moreover, cancer patients may be more susceptible to SARS-CoV-2 infection. Our data suggested that CTSB/L are overexpressed in aerodigestive and genitourinary cancers when compared with that in matched normal tissues, and their expressions were closely related to the prognosis of some cancer types. Interestingly, CTSB/L expressions were significantly correlated with immune cell infiltration in manifold cancer tissues and their corresponding normal tissues. In conclusion, our study shows a comprehensive bioinformatic analysis of two important SARS-CoV-2 entry–related proteases, which could provide a potential indication on prevention of SARS-CoV-2 infection.
format Online
Article
Text
id pubmed-8826559
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-88265592022-02-10 Comprehensive and Integrative Analysis of Two Novel SARS-CoV-2 Entry Associated Proteases CTSB and CTSL in Healthy Individuals and Cancer Patients Huang, Yongbiao Li, Shiyu Huang, Shanshan Tu, Jingyao Chen, Xinyi Xiao, Lingyan Liu, Bo Yuan, Xianglin Front Bioeng Biotechnol Bioengineering and Biotechnology More than 200 million people have been infected with severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and 4 million deaths have been reported worldwide to date. Cathepsin B/cathepsin L (CTSB/L) are SARS-CoV-2 entry–associated proteases and facilitate SARS-CoV-2 to infect host cells. However, the expressions of CTSB/L in healthy individuals and cancer patients remain not fully elucidated yet. Here, we comprehensively profiled the expressions and distributions of CTSB/L in human normal tissues, cancer tissues, and cell lines. Moreover, we compared CTSB/L expressions between various cancers and matched normal tissues, and investigated their genetic alteration and prognostic values in pan-cancer. Finally, we also explored the correlation between CTSB/L expressions and immune infiltration. We found that CTSB was highly expressed in most tissues, and CTSL was highly expressed predominantly in the digestive, urinary, and respiratory systems, such as the lungs, liver and gallbladder, and kidney tissues in the translational level. Moreover, cancer patients may be more susceptible to SARS-CoV-2 infection. Our data suggested that CTSB/L are overexpressed in aerodigestive and genitourinary cancers when compared with that in matched normal tissues, and their expressions were closely related to the prognosis of some cancer types. Interestingly, CTSB/L expressions were significantly correlated with immune cell infiltration in manifold cancer tissues and their corresponding normal tissues. In conclusion, our study shows a comprehensive bioinformatic analysis of two important SARS-CoV-2 entry–related proteases, which could provide a potential indication on prevention of SARS-CoV-2 infection. Frontiers Media S.A. 2022-01-26 /pmc/articles/PMC8826559/ /pubmed/35155389 http://dx.doi.org/10.3389/fbioe.2022.780751 Text en Copyright © 2022 Huang, Li, Huang, Tu, Chen, Xiao, Liu and Yuan. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Bioengineering and Biotechnology
Huang, Yongbiao
Li, Shiyu
Huang, Shanshan
Tu, Jingyao
Chen, Xinyi
Xiao, Lingyan
Liu, Bo
Yuan, Xianglin
Comprehensive and Integrative Analysis of Two Novel SARS-CoV-2 Entry Associated Proteases CTSB and CTSL in Healthy Individuals and Cancer Patients
title Comprehensive and Integrative Analysis of Two Novel SARS-CoV-2 Entry Associated Proteases CTSB and CTSL in Healthy Individuals and Cancer Patients
title_full Comprehensive and Integrative Analysis of Two Novel SARS-CoV-2 Entry Associated Proteases CTSB and CTSL in Healthy Individuals and Cancer Patients
title_fullStr Comprehensive and Integrative Analysis of Two Novel SARS-CoV-2 Entry Associated Proteases CTSB and CTSL in Healthy Individuals and Cancer Patients
title_full_unstemmed Comprehensive and Integrative Analysis of Two Novel SARS-CoV-2 Entry Associated Proteases CTSB and CTSL in Healthy Individuals and Cancer Patients
title_short Comprehensive and Integrative Analysis of Two Novel SARS-CoV-2 Entry Associated Proteases CTSB and CTSL in Healthy Individuals and Cancer Patients
title_sort comprehensive and integrative analysis of two novel sars-cov-2 entry associated proteases ctsb and ctsl in healthy individuals and cancer patients
topic Bioengineering and Biotechnology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8826559/
https://www.ncbi.nlm.nih.gov/pubmed/35155389
http://dx.doi.org/10.3389/fbioe.2022.780751
work_keys_str_mv AT huangyongbiao comprehensiveandintegrativeanalysisoftwonovelsarscov2entryassociatedproteasesctsbandctslinhealthyindividualsandcancerpatients
AT lishiyu comprehensiveandintegrativeanalysisoftwonovelsarscov2entryassociatedproteasesctsbandctslinhealthyindividualsandcancerpatients
AT huangshanshan comprehensiveandintegrativeanalysisoftwonovelsarscov2entryassociatedproteasesctsbandctslinhealthyindividualsandcancerpatients
AT tujingyao comprehensiveandintegrativeanalysisoftwonovelsarscov2entryassociatedproteasesctsbandctslinhealthyindividualsandcancerpatients
AT chenxinyi comprehensiveandintegrativeanalysisoftwonovelsarscov2entryassociatedproteasesctsbandctslinhealthyindividualsandcancerpatients
AT xiaolingyan comprehensiveandintegrativeanalysisoftwonovelsarscov2entryassociatedproteasesctsbandctslinhealthyindividualsandcancerpatients
AT liubo comprehensiveandintegrativeanalysisoftwonovelsarscov2entryassociatedproteasesctsbandctslinhealthyindividualsandcancerpatients
AT yuanxianglin comprehensiveandintegrativeanalysisoftwonovelsarscov2entryassociatedproteasesctsbandctslinhealthyindividualsandcancerpatients