Cargando…

Phylogeography Reveals Association between Swine Trade and the Spread of Porcine Epidemic Diarrhea Virus in China and across the World

The ongoing SARS (severe acute respiratory syndrome)-CoV (coronavirus)-2 pandemic has exposed major gaps in our knowledge on the origin, ecology, evolution, and spread of animal coronaviruses. Porcine epidemic diarrhea virus (PEDV) is a member of the genus Alphacoronavirus in the family Coronavirida...

Descripción completa

Detalles Bibliográficos
Autores principales:	He, Wan-Ting, Bollen, Nena, Xu, Yi, Zhao, Jin, Dellicour, Simon, Yan, Ziqing, Gong, Wenjie, Zhang, Cheng, Zhang, Letian, Lu, Meng, Lai, Alexander, Suchard, Marc A, Ji, Xiang, Tu, Changchun, Lemey, Philippe, Baele, Guy, Su, Shuo
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2021
Materias:	Discoveries
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8826572/ https://www.ncbi.nlm.nih.gov/pubmed/34951645 http://dx.doi.org/10.1093/molbev/msab364

Ejemplares similares

Genomic Epidemiology, Evolution, and Transmission Dynamics of Porcine Deltacoronavirus
por: He, Wan-Ting, et al.
Publicado: (2020)

Accommodating sampling location uncertainty in continuous phylogeography
por: Dellicour, Simon, et al.
Publicado: (2022)

In Search of Covariates of HIV-1 Subtype B Spread in the United States—A Cautionary Tale of Large-Scale Bayesian Phylogeography
por: Hong, Samuel L., et al.
Publicado: (2020)

Inferring Heterogeneous Evolutionary Processes Through Time: from Sequence Substitution to Phylogeography
por: Bielejec, Filip, et al.
Publicado: (2014)

SPREAD 4: online visualisation of pathogen phylogeographic reconstructions
por: Nahata, Kanika D, et al.
Publicado: (2022)

Phycova — a tool for exploring covariates of pathogen spread
por: Blokker, Tim, et al.
Publicado: (2022)

The Mitogenome Relationships and Phylogeography of Barn Swallows (Hirundo rustica)
por: Lombardo, Gianluca, et al.
Publicado: (2022)

On the importance of negative controls in viral landscape phylogeography
por: Dellicour, Simon, et al.
Publicado: (2018)

Bayesian Phylogeography Finds Its Roots
por: Lemey, Philippe, et al.
Publicado: (2009)

Impact and mitigation of sampling bias to determine viral spread: Evaluating discrete phylogeography through CTMC modeling and structured coalescent model approximations
por: Layan, Maylis, et al.
Publicado: (2023)

Human-Mediated Admixture and Selection Shape the Diversity on the Modern Swine (Sus scrofa) Y Chromosomes
por: Ai, Huashui, et al.
Publicado: (2021)

Global Dynamics of Porcine Enteric Coronavirus PEDV Epidemiology, Evolution, and Transmission
por: Zhang, Hao, et al.
Publicado: (2023)

Rubisco Adaptation Is More Limited by Phylogenetic Constraint Than by Catalytic Trade-off
por: Bouvier, Jacques W, et al.
Publicado: (2021)

Fitness Trade-Offs Determine the Role of the Molecular Chaperonin GroEL in Buffering Mutations
por: Sabater-Muñoz, Beatriz, et al.
Publicado: (2015)

Malagasy Genetic Ancestry Comes from an Historical Malay Trading Post in Southeast Borneo
por: Brucato, Nicolas, et al.
Publicado: (2016)

Synergism, Bifunctionality, and the Evolution of a Gradual Sensory Trade-off in Hummingbird Taste Receptors
por: Cockburn, Glenn, et al.
Publicado: (2022)

On the Use of Phylogeographic Inference to Infer the Dispersal History of Rabies Virus: A Review Study
por: Nahata, Kanika D., et al.
Publicado: (2021)

Evolutionary Epigenomics of Retrotransposon-Mediated Methylation Spreading in Rice
por: Choi, Jae Young, et al.
Publicado: (2018)

Trade-Offs Predicted by Metabolic Network Structure Give Rise to Evolutionary Specialization and Phenotypic Diversification
por: Ekkers, David M, et al.
Publicado: (2022)

The Genomic Architecture of Adaptation to Larval Malnutrition Points to a Trade-off with Adult Starvation Resistance in Drosophila
por: Kawecki, Tadeusz J., et al.
Publicado: (2021)

Evolutionary Processes in the Emergence and Recent Spread of the Syphilis Agent, Treponema pallidum
por: Pla-Díaz, Marta, et al.
Publicado: (2021)

Assessing Human Genome-wide Variation in the Massim Region of Papua New Guinea and Implications for the Kula Trading Tradition
por: Liu, Dang, et al.
Publicado: (2022)

Multiple Resistance at No Cost: Rifampicin and Streptomycin a Dangerous Liaison in the Spread of Antibiotic Resistance
por: Durão, Paulo, et al.
Publicado: (2015)

The Phylogeography and Spatiotemporal Spread of South-Central Skunk Rabies Virus
por: Kuzmina, Natalia A., et al.
Publicado: (2013)

Phylodynamic assessment of intervention strategies for the West African Ebola virus outbreak
por: Dellicour, Simon, et al.
Publicado: (2018)

Horizontal Gene Transfer, Fitness Costs and Mobility Shape the Spread of Antibiotic Resistance Genes into Experimental Populations of Acinetobacter Baylyi
por: Sezmis, Aysha L, et al.
Publicado: (2023)

Vaccines for porcine epidemic diarrhea virus and other swine coronaviruses
por: Gerdts, Volker, et al.
Publicado: (2017)

nosoi: A stochastic agent‐based transmission chain simulation framework in r
por: Lequime, Sebastian, et al.
Publicado: (2020)

Newly identified lineages of porcine hemagglutinating encephalomyelitis virus exhibit respiratory phenotype
por: He, Wan-Ting, et al.
Publicado: (2023)

Accommodating individual travel history, global mobility, and unsampled diversity in phylogeography: a SARS-CoV-2 case study.
por: Lemey, Philippe, et al.
Publicado: (2020)

Emerging Concepts of Data Integration in Pathogen Phylodynamics
por: Baele, Guy, et al.
Publicado: (2017)

Bayesian codon substitution modelling to identify sources of pathogen evolutionary rate variation
por: Baele, Guy, et al.
Publicado: (2016)

Hamiltonian Monte Carlo sampling to estimate past population dynamics using the skygrid coalescent model in a Bayesian phylogenetics framework
por: Baele, Guy, et al.
Publicado: (2020)

Endogenous Viral Elements in Shrew Genomes Provide Insights into Pestivirus Ancient History
por: Li, Yiqiao, et al.
Publicado: (2022)

Changes in the Swine Gut Microbiota in Response to Porcine Epidemic Diarrhea Infection
por: Koh, Hyeon-Woo, et al.
Publicado: (2015)

Investigating the introduction of porcine epidemic diarrhea virus into an Ohio swine operation
por: Bowman, Andrew S, et al.
Publicado: (2015)

SPREAD: spatial phylogenetic reconstruction of evolutionary dynamics
por: Bielejec, Filip, et al.
Publicado: (2011)

A63 Quantifying the dynamics of evolutionary rates through time
por: Membrebe, J V, et al.
Publicado: (2019)

Comparing patterns and scales of plant virus phylogeography: Rice yellow mottle virus in Madagascar and in continental Africa
por: Rakotomalala, Mbolarinosy, et al.
Publicado: (2019)

New Evolutionary Insights into RpoA: A Novel Quorum Sensing Reprograming Factor in Pseudomonas aeruginosa
por: Cai, Wenjie, et al.
Publicado: (2023)

Cannot write session to /tmp/vufind_sessions/sess_2oj2ftl4qfgqrottik8j90chhc