Cargando…

Identification of Ferroptosis-Related Genes Signature Predicting the Efficiency of Invasion and Metastasis Ability in Colon Adenocarcinoma

Background: Colon adenocarcinoma (COAD) is one of the most prevalent cancers worldwide and has become a leading cause of cancer death. Although many potential biomarkers of COAD have been screened with the bioinformatics method, it is necessary to explore novel markers for the diagnosis and appropri...

Descripción completa

Detalles Bibliográficos
Autores principales: Shi, Chunlei, Xie, Yongjie, Li, Xueyang, Li, Guangming, Liu, Weishuai, Pei, Wenju, Liu, Jing, Yu, Xiaozhou, Liu, Tong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8826729/
https://www.ncbi.nlm.nih.gov/pubmed/35155451
http://dx.doi.org/10.3389/fcell.2021.815104
_version_ 1784647488846692352
author Shi, Chunlei
Xie, Yongjie
Li, Xueyang
Li, Guangming
Liu, Weishuai
Pei, Wenju
Liu, Jing
Yu, Xiaozhou
Liu, Tong
author_facet Shi, Chunlei
Xie, Yongjie
Li, Xueyang
Li, Guangming
Liu, Weishuai
Pei, Wenju
Liu, Jing
Yu, Xiaozhou
Liu, Tong
author_sort Shi, Chunlei
collection PubMed
description Background: Colon adenocarcinoma (COAD) is one of the most prevalent cancers worldwide and has become a leading cause of cancer death. Although many potential biomarkers of COAD have been screened with the bioinformatics method, it is necessary to explore novel markers for the diagnosis and appropriate individual treatments for COAD patients due to the high heterogeneity of this disease. Epithelial-to-mesenchymal transition (EMT)-mediated tumor metastasis suggests poor prognosis of cancers. Ferroptosis is involved in tumor development. EMT signaling can increase the cellular sensitivity to ferroptosis in tumors. The aim of our study is finding novel prognostic biomarkers to determine COAD patients for predicting efficiency of metastasis status and targeting precise ferroptosis-related therapy. Methods: A novel gene signature related to metastasis and ferroptosis was identified combing with risk model and WGCNA analysis with R software. The biological functions and predictive ability of the signature in COAD were explored through bioinformatics analysis. Results: We established a four-gene prognostic signature (MMP7, YAP1, PCOLCE, and HOXC11) based on EMT and ferroptosis related genes and validated the reliability and effectiveness of this model in COAD. This four-gene prognostic signature was closely connected with metastasis and ferroptosis sensitivity of COAD. Moreover, WGCNA analysis further confirmed the correlation between PCOLCE, HOXC11, and liver and lymphatic invasion of COAD. Conclusion: The four genes may become potential prognostic biomarkers to identify COAD patients with metastasis. Moreover, this four-gene signature may be able to determine the COAD suitable with ferroptosis induction therapy. Finally, PCOLCE2 and HOXC11 were selected individually because of their novelties and precise prediction ability. Overall, this signature provided novel possibilities for better prognostic evaluation of COAD patients and may be of great guiding significance for individualized treatment and clinical decision.
format Online
Article
Text
id pubmed-8826729
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-88267292022-02-10 Identification of Ferroptosis-Related Genes Signature Predicting the Efficiency of Invasion and Metastasis Ability in Colon Adenocarcinoma Shi, Chunlei Xie, Yongjie Li, Xueyang Li, Guangming Liu, Weishuai Pei, Wenju Liu, Jing Yu, Xiaozhou Liu, Tong Front Cell Dev Biol Cell and Developmental Biology Background: Colon adenocarcinoma (COAD) is one of the most prevalent cancers worldwide and has become a leading cause of cancer death. Although many potential biomarkers of COAD have been screened with the bioinformatics method, it is necessary to explore novel markers for the diagnosis and appropriate individual treatments for COAD patients due to the high heterogeneity of this disease. Epithelial-to-mesenchymal transition (EMT)-mediated tumor metastasis suggests poor prognosis of cancers. Ferroptosis is involved in tumor development. EMT signaling can increase the cellular sensitivity to ferroptosis in tumors. The aim of our study is finding novel prognostic biomarkers to determine COAD patients for predicting efficiency of metastasis status and targeting precise ferroptosis-related therapy. Methods: A novel gene signature related to metastasis and ferroptosis was identified combing with risk model and WGCNA analysis with R software. The biological functions and predictive ability of the signature in COAD were explored through bioinformatics analysis. Results: We established a four-gene prognostic signature (MMP7, YAP1, PCOLCE, and HOXC11) based on EMT and ferroptosis related genes and validated the reliability and effectiveness of this model in COAD. This four-gene prognostic signature was closely connected with metastasis and ferroptosis sensitivity of COAD. Moreover, WGCNA analysis further confirmed the correlation between PCOLCE, HOXC11, and liver and lymphatic invasion of COAD. Conclusion: The four genes may become potential prognostic biomarkers to identify COAD patients with metastasis. Moreover, this four-gene signature may be able to determine the COAD suitable with ferroptosis induction therapy. Finally, PCOLCE2 and HOXC11 were selected individually because of their novelties and precise prediction ability. Overall, this signature provided novel possibilities for better prognostic evaluation of COAD patients and may be of great guiding significance for individualized treatment and clinical decision. Frontiers Media S.A. 2022-01-26 /pmc/articles/PMC8826729/ /pubmed/35155451 http://dx.doi.org/10.3389/fcell.2021.815104 Text en Copyright © 2022 Shi, Xie, Li, Li, Liu, Pei, Liu, Yu and Liu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Cell and Developmental Biology
Shi, Chunlei
Xie, Yongjie
Li, Xueyang
Li, Guangming
Liu, Weishuai
Pei, Wenju
Liu, Jing
Yu, Xiaozhou
Liu, Tong
Identification of Ferroptosis-Related Genes Signature Predicting the Efficiency of Invasion and Metastasis Ability in Colon Adenocarcinoma
title Identification of Ferroptosis-Related Genes Signature Predicting the Efficiency of Invasion and Metastasis Ability in Colon Adenocarcinoma
title_full Identification of Ferroptosis-Related Genes Signature Predicting the Efficiency of Invasion and Metastasis Ability in Colon Adenocarcinoma
title_fullStr Identification of Ferroptosis-Related Genes Signature Predicting the Efficiency of Invasion and Metastasis Ability in Colon Adenocarcinoma
title_full_unstemmed Identification of Ferroptosis-Related Genes Signature Predicting the Efficiency of Invasion and Metastasis Ability in Colon Adenocarcinoma
title_short Identification of Ferroptosis-Related Genes Signature Predicting the Efficiency of Invasion and Metastasis Ability in Colon Adenocarcinoma
title_sort identification of ferroptosis-related genes signature predicting the efficiency of invasion and metastasis ability in colon adenocarcinoma
topic Cell and Developmental Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8826729/
https://www.ncbi.nlm.nih.gov/pubmed/35155451
http://dx.doi.org/10.3389/fcell.2021.815104
work_keys_str_mv AT shichunlei identificationofferroptosisrelatedgenessignaturepredictingtheefficiencyofinvasionandmetastasisabilityincolonadenocarcinoma
AT xieyongjie identificationofferroptosisrelatedgenessignaturepredictingtheefficiencyofinvasionandmetastasisabilityincolonadenocarcinoma
AT lixueyang identificationofferroptosisrelatedgenessignaturepredictingtheefficiencyofinvasionandmetastasisabilityincolonadenocarcinoma
AT liguangming identificationofferroptosisrelatedgenessignaturepredictingtheefficiencyofinvasionandmetastasisabilityincolonadenocarcinoma
AT liuweishuai identificationofferroptosisrelatedgenessignaturepredictingtheefficiencyofinvasionandmetastasisabilityincolonadenocarcinoma
AT peiwenju identificationofferroptosisrelatedgenessignaturepredictingtheefficiencyofinvasionandmetastasisabilityincolonadenocarcinoma
AT liujing identificationofferroptosisrelatedgenessignaturepredictingtheefficiencyofinvasionandmetastasisabilityincolonadenocarcinoma
AT yuxiaozhou identificationofferroptosisrelatedgenessignaturepredictingtheefficiencyofinvasionandmetastasisabilityincolonadenocarcinoma
AT liutong identificationofferroptosisrelatedgenessignaturepredictingtheefficiencyofinvasionandmetastasisabilityincolonadenocarcinoma