Cargando…
Volatile organic compound profiling to explore primary graft dysfunction after lung transplantation
Primary graft dysfunction (PGD) is a major determinant of morbidity and mortality following lung transplantation. Delineating basic mechanisms and molecular signatures of PGD remain a fundamental challenge. This pilot study examines if the pulmonary volatile organic compound (VOC) spectrum relate to...
Autores principales: | , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8827074/ https://www.ncbi.nlm.nih.gov/pubmed/35136125 http://dx.doi.org/10.1038/s41598-022-05994-2 |
_version_ | 1784647555400859648 |
---|---|
author | Stefanuto, Pierre-Hugues Romano, Rosalba Rees, Christiaan A. Nasir, Mavra Thakuria, Louit Simon, Andre Reed, Anna K. Marczin, Nandor Hill, Jane E. |
author_facet | Stefanuto, Pierre-Hugues Romano, Rosalba Rees, Christiaan A. Nasir, Mavra Thakuria, Louit Simon, Andre Reed, Anna K. Marczin, Nandor Hill, Jane E. |
author_sort | Stefanuto, Pierre-Hugues |
collection | PubMed |
description | Primary graft dysfunction (PGD) is a major determinant of morbidity and mortality following lung transplantation. Delineating basic mechanisms and molecular signatures of PGD remain a fundamental challenge. This pilot study examines if the pulmonary volatile organic compound (VOC) spectrum relate to PGD and postoperative outcomes. The VOC profiles of 58 bronchoalveolar lavage fluid (BALF) and blind bronchial aspirate samples from 35 transplant patients were extracted using solid-phase-microextraction and analyzed with comprehensive two-dimensional gas chromatography coupled to time-of-flight mass spectrometry. The support vector machine algorithm was used to identify VOCs that could differentiate patients with severe from lower grade PGD. Using 20 statistically significant VOCs from the sample headspace collected immediately after transplantation (< 6 h), severe PGD was differentiable from low PGD with an AUROC of 0.90 and an accuracy of 0.83 on test set samples. The model was somewhat effective for later time points with an AUROC of 0.80. Three major chemical classes in the model were dominated by alkylated hydrocarbons, linear hydrocarbons, and aldehydes in severe PGD samples. These VOCs may have important clinical and mechanistic implications, therefore large-scale study and potential translation to breath analysis is recommended. |
format | Online Article Text |
id | pubmed-8827074 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-88270742022-02-10 Volatile organic compound profiling to explore primary graft dysfunction after lung transplantation Stefanuto, Pierre-Hugues Romano, Rosalba Rees, Christiaan A. Nasir, Mavra Thakuria, Louit Simon, Andre Reed, Anna K. Marczin, Nandor Hill, Jane E. Sci Rep Article Primary graft dysfunction (PGD) is a major determinant of morbidity and mortality following lung transplantation. Delineating basic mechanisms and molecular signatures of PGD remain a fundamental challenge. This pilot study examines if the pulmonary volatile organic compound (VOC) spectrum relate to PGD and postoperative outcomes. The VOC profiles of 58 bronchoalveolar lavage fluid (BALF) and blind bronchial aspirate samples from 35 transplant patients were extracted using solid-phase-microextraction and analyzed with comprehensive two-dimensional gas chromatography coupled to time-of-flight mass spectrometry. The support vector machine algorithm was used to identify VOCs that could differentiate patients with severe from lower grade PGD. Using 20 statistically significant VOCs from the sample headspace collected immediately after transplantation (< 6 h), severe PGD was differentiable from low PGD with an AUROC of 0.90 and an accuracy of 0.83 on test set samples. The model was somewhat effective for later time points with an AUROC of 0.80. Three major chemical classes in the model were dominated by alkylated hydrocarbons, linear hydrocarbons, and aldehydes in severe PGD samples. These VOCs may have important clinical and mechanistic implications, therefore large-scale study and potential translation to breath analysis is recommended. Nature Publishing Group UK 2022-02-08 /pmc/articles/PMC8827074/ /pubmed/35136125 http://dx.doi.org/10.1038/s41598-022-05994-2 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Stefanuto, Pierre-Hugues Romano, Rosalba Rees, Christiaan A. Nasir, Mavra Thakuria, Louit Simon, Andre Reed, Anna K. Marczin, Nandor Hill, Jane E. Volatile organic compound profiling to explore primary graft dysfunction after lung transplantation |
title | Volatile organic compound profiling to explore primary graft dysfunction after lung transplantation |
title_full | Volatile organic compound profiling to explore primary graft dysfunction after lung transplantation |
title_fullStr | Volatile organic compound profiling to explore primary graft dysfunction after lung transplantation |
title_full_unstemmed | Volatile organic compound profiling to explore primary graft dysfunction after lung transplantation |
title_short | Volatile organic compound profiling to explore primary graft dysfunction after lung transplantation |
title_sort | volatile organic compound profiling to explore primary graft dysfunction after lung transplantation |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8827074/ https://www.ncbi.nlm.nih.gov/pubmed/35136125 http://dx.doi.org/10.1038/s41598-022-05994-2 |
work_keys_str_mv | AT stefanutopierrehugues volatileorganiccompoundprofilingtoexploreprimarygraftdysfunctionafterlungtransplantation AT romanorosalba volatileorganiccompoundprofilingtoexploreprimarygraftdysfunctionafterlungtransplantation AT reeschristiaana volatileorganiccompoundprofilingtoexploreprimarygraftdysfunctionafterlungtransplantation AT nasirmavra volatileorganiccompoundprofilingtoexploreprimarygraftdysfunctionafterlungtransplantation AT thakurialouit volatileorganiccompoundprofilingtoexploreprimarygraftdysfunctionafterlungtransplantation AT simonandre volatileorganiccompoundprofilingtoexploreprimarygraftdysfunctionafterlungtransplantation AT reedannak volatileorganiccompoundprofilingtoexploreprimarygraftdysfunctionafterlungtransplantation AT marczinnandor volatileorganiccompoundprofilingtoexploreprimarygraftdysfunctionafterlungtransplantation AT hilljanee volatileorganiccompoundprofilingtoexploreprimarygraftdysfunctionafterlungtransplantation |