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Characterization and phylogeny of fungi isolated from industrial wastewater using multiple genes
The aim of this study was the isolation and molecular characterization of fungi from untreated refinery effluent by using multiple conserved genes. The Fungi isolated were characterized based on PCR amplification and genomic sequencing of the internal transcribed spacer region (ITS), partial β-tubul...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8827091/ https://www.ncbi.nlm.nih.gov/pubmed/35136108 http://dx.doi.org/10.1038/s41598-022-05820-9 |
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author | Ezeonuegbu, Blessing Amaka Abdullahi, Machido Dauda Whong, Clement M. Z. Sohunago, Japhet Wisdom Kassem, Hazem S. Yaro, Clement Ameh Hetta, Helal F. Mostafa-Hedeab, Gomaa Zouganelis, George D. Batiha, Gaber El-Saber |
author_facet | Ezeonuegbu, Blessing Amaka Abdullahi, Machido Dauda Whong, Clement M. Z. Sohunago, Japhet Wisdom Kassem, Hazem S. Yaro, Clement Ameh Hetta, Helal F. Mostafa-Hedeab, Gomaa Zouganelis, George D. Batiha, Gaber El-Saber |
author_sort | Ezeonuegbu, Blessing Amaka |
collection | PubMed |
description | The aim of this study was the isolation and molecular characterization of fungi from untreated refinery effluent by using multiple conserved genes. The Fungi isolated were characterized based on PCR amplification and genomic sequencing of the internal transcribed spacer region (ITS), partial β-tubulin (BenA), calmodulin (CaM), and RNA polymerase second large subunit (RPB2) genes, along with morphological characterization. The obtained sequences were subjected to BLAST analysis and the corresponding fungal isolates were assigned species names after comparison with representative sequences available in GenBank. Fifteen (15) Fungi species belonging to four genera of Aspergillus, Penicillium, Fusarium, and Trichoderma with Aspergillus as the predominant genus were identified. Therefore these genes should be used as molecular markers for species level identification of fungi (especially Aspergillus and Penicillium as proven in this study. |
format | Online Article Text |
id | pubmed-8827091 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-88270912022-02-10 Characterization and phylogeny of fungi isolated from industrial wastewater using multiple genes Ezeonuegbu, Blessing Amaka Abdullahi, Machido Dauda Whong, Clement M. Z. Sohunago, Japhet Wisdom Kassem, Hazem S. Yaro, Clement Ameh Hetta, Helal F. Mostafa-Hedeab, Gomaa Zouganelis, George D. Batiha, Gaber El-Saber Sci Rep Article The aim of this study was the isolation and molecular characterization of fungi from untreated refinery effluent by using multiple conserved genes. The Fungi isolated were characterized based on PCR amplification and genomic sequencing of the internal transcribed spacer region (ITS), partial β-tubulin (BenA), calmodulin (CaM), and RNA polymerase second large subunit (RPB2) genes, along with morphological characterization. The obtained sequences were subjected to BLAST analysis and the corresponding fungal isolates were assigned species names after comparison with representative sequences available in GenBank. Fifteen (15) Fungi species belonging to four genera of Aspergillus, Penicillium, Fusarium, and Trichoderma with Aspergillus as the predominant genus were identified. Therefore these genes should be used as molecular markers for species level identification of fungi (especially Aspergillus and Penicillium as proven in this study. Nature Publishing Group UK 2022-02-08 /pmc/articles/PMC8827091/ /pubmed/35136108 http://dx.doi.org/10.1038/s41598-022-05820-9 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Ezeonuegbu, Blessing Amaka Abdullahi, Machido Dauda Whong, Clement M. Z. Sohunago, Japhet Wisdom Kassem, Hazem S. Yaro, Clement Ameh Hetta, Helal F. Mostafa-Hedeab, Gomaa Zouganelis, George D. Batiha, Gaber El-Saber Characterization and phylogeny of fungi isolated from industrial wastewater using multiple genes |
title | Characterization and phylogeny of fungi isolated from industrial wastewater using multiple genes |
title_full | Characterization and phylogeny of fungi isolated from industrial wastewater using multiple genes |
title_fullStr | Characterization and phylogeny of fungi isolated from industrial wastewater using multiple genes |
title_full_unstemmed | Characterization and phylogeny of fungi isolated from industrial wastewater using multiple genes |
title_short | Characterization and phylogeny of fungi isolated from industrial wastewater using multiple genes |
title_sort | characterization and phylogeny of fungi isolated from industrial wastewater using multiple genes |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8827091/ https://www.ncbi.nlm.nih.gov/pubmed/35136108 http://dx.doi.org/10.1038/s41598-022-05820-9 |
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