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Contribution of classification based on ferroptosis-related genes to the heterogeneity of MAFLD
BACKGROUND: Metabolic dysfunction-associated fatty liver disease (MAFLD) is a highly heterogeneous disease and its heterogeneity might be associated with ferroptosis because ferroptosis plays an important role in the development of MAFLD. We aimed to perform integrative analysis of ferroptosis relat...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8830092/ https://www.ncbi.nlm.nih.gov/pubmed/35144542 http://dx.doi.org/10.1186/s12876-022-02137-9 |
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author | Dai, Xin Zhang, Rui Wang, Bangmao |
author_facet | Dai, Xin Zhang, Rui Wang, Bangmao |
author_sort | Dai, Xin |
collection | PubMed |
description | BACKGROUND: Metabolic dysfunction-associated fatty liver disease (MAFLD) is a highly heterogeneous disease and its heterogeneity might be associated with ferroptosis because ferroptosis plays an important role in the development of MAFLD. We aimed to perform integrative analysis of ferroptosis related genes and MAFLD subtypes using bioinformatics. METHODS: A differential expression analysis was performed to identify key ferroptosis-related genes associated with the clinical characteristics of MAFLD. Furthermore, consensus k clustering was utilized to distinguish ferroptosis-related clinical subtypes of MAFLD and assess the association of ferroptosis-related gene expression and clinical features between patients with different subtypes of MAFLD. Moreover, the variation in the immune status and regulatory relationship of ferroptosis-related genes in individuals with MAFLD was also explored using single sample gene set enrichment analysis, weighted gene coexpression network analysis and enrichment analyses. RESULTS: Eight ferroptosis-related genes were identified as closely associated with both the hepatic steatosis grade and non-alcoholic fatty liver disease activity score. Two subtypes of MAFLD based on ferroptosis-related genes were identified by consensus clustering. They exhibited significantly different clinical features, immune statuses, biological processes and outcomes. The progression of the two subtypes was associated with immunity. CONCLUSIONS: Two highly heterogeneous subtypes of MAFLD with significantly distinct clinical features, biological processes and immune statuses were identified based on ferroptosis-associated genes, which strongly supports the hypothesis that ferroptosis plays an important role in the development of MAFLD. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12876-022-02137-9. |
format | Online Article Text |
id | pubmed-8830092 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-88300922022-02-11 Contribution of classification based on ferroptosis-related genes to the heterogeneity of MAFLD Dai, Xin Zhang, Rui Wang, Bangmao BMC Gastroenterol Research BACKGROUND: Metabolic dysfunction-associated fatty liver disease (MAFLD) is a highly heterogeneous disease and its heterogeneity might be associated with ferroptosis because ferroptosis plays an important role in the development of MAFLD. We aimed to perform integrative analysis of ferroptosis related genes and MAFLD subtypes using bioinformatics. METHODS: A differential expression analysis was performed to identify key ferroptosis-related genes associated with the clinical characteristics of MAFLD. Furthermore, consensus k clustering was utilized to distinguish ferroptosis-related clinical subtypes of MAFLD and assess the association of ferroptosis-related gene expression and clinical features between patients with different subtypes of MAFLD. Moreover, the variation in the immune status and regulatory relationship of ferroptosis-related genes in individuals with MAFLD was also explored using single sample gene set enrichment analysis, weighted gene coexpression network analysis and enrichment analyses. RESULTS: Eight ferroptosis-related genes were identified as closely associated with both the hepatic steatosis grade and non-alcoholic fatty liver disease activity score. Two subtypes of MAFLD based on ferroptosis-related genes were identified by consensus clustering. They exhibited significantly different clinical features, immune statuses, biological processes and outcomes. The progression of the two subtypes was associated with immunity. CONCLUSIONS: Two highly heterogeneous subtypes of MAFLD with significantly distinct clinical features, biological processes and immune statuses were identified based on ferroptosis-associated genes, which strongly supports the hypothesis that ferroptosis plays an important role in the development of MAFLD. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12876-022-02137-9. BioMed Central 2022-02-10 /pmc/articles/PMC8830092/ /pubmed/35144542 http://dx.doi.org/10.1186/s12876-022-02137-9 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Dai, Xin Zhang, Rui Wang, Bangmao Contribution of classification based on ferroptosis-related genes to the heterogeneity of MAFLD |
title | Contribution of classification based on ferroptosis-related genes to the heterogeneity of MAFLD |
title_full | Contribution of classification based on ferroptosis-related genes to the heterogeneity of MAFLD |
title_fullStr | Contribution of classification based on ferroptosis-related genes to the heterogeneity of MAFLD |
title_full_unstemmed | Contribution of classification based on ferroptosis-related genes to the heterogeneity of MAFLD |
title_short | Contribution of classification based on ferroptosis-related genes to the heterogeneity of MAFLD |
title_sort | contribution of classification based on ferroptosis-related genes to the heterogeneity of mafld |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8830092/ https://www.ncbi.nlm.nih.gov/pubmed/35144542 http://dx.doi.org/10.1186/s12876-022-02137-9 |
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