De Novo Genome Assembly of Stinkhorn Mushroom Clathrus columnatus (Basidiomycota, Fungi) Using Illumina and Nanopore Sequencing Data

We report the reference genome of Clathrus columnatus isolate MO-923, which was isolated from Chichijima Island, the Ogasawara (Bonin) Islands, Japan. Oxford Nanopore Technologies MinION and Illumina sequence reads were assembled using NECAT and polished using Pilon to yield a 36.51-Mb genome with 1...

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Detalles Bibliográficos
Autores principales: Ogiso-Tanaka, Eri, Itagaki, Hiyori, Ohmae, Muneyuki, Hosoya, Tsuyoshi, Hosaka, Kentaro
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2022
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8830316/
https://www.ncbi.nlm.nih.gov/pubmed/35142541
http://dx.doi.org/10.1128/mra.01026-21
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author Ogiso-Tanaka, Eri
Itagaki, Hiyori
Ohmae, Muneyuki
Hosoya, Tsuyoshi
Hosaka, Kentaro
author_facet Ogiso-Tanaka, Eri
Itagaki, Hiyori
Ohmae, Muneyuki
Hosoya, Tsuyoshi
Hosaka, Kentaro
author_sort Ogiso-Tanaka, Eri
collection PubMed
description We report the reference genome of Clathrus columnatus isolate MO-923, which was isolated from Chichijima Island, the Ogasawara (Bonin) Islands, Japan. Oxford Nanopore Technologies MinION and Illumina sequence reads were assembled using NECAT and polished using Pilon to yield a 36.51-Mb genome with 10,625 predicted protein-coding genes.
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spelling pubmed-88303162022-03-02 De Novo Genome Assembly of Stinkhorn Mushroom Clathrus columnatus (Basidiomycota, Fungi) Using Illumina and Nanopore Sequencing Data Ogiso-Tanaka, Eri Itagaki, Hiyori Ohmae, Muneyuki Hosoya, Tsuyoshi Hosaka, Kentaro Microbiol Resour Announc Genome Sequences We report the reference genome of Clathrus columnatus isolate MO-923, which was isolated from Chichijima Island, the Ogasawara (Bonin) Islands, Japan. Oxford Nanopore Technologies MinION and Illumina sequence reads were assembled using NECAT and polished using Pilon to yield a 36.51-Mb genome with 10,625 predicted protein-coding genes. American Society for Microbiology 2022-02-10 /pmc/articles/PMC8830316/ /pubmed/35142541 http://dx.doi.org/10.1128/mra.01026-21 Text en Copyright © 2022 Ogiso-Tanaka et al. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Genome Sequences
Ogiso-Tanaka, Eri
Itagaki, Hiyori
Ohmae, Muneyuki
Hosoya, Tsuyoshi
Hosaka, Kentaro
De Novo Genome Assembly of Stinkhorn Mushroom Clathrus columnatus (Basidiomycota, Fungi) Using Illumina and Nanopore Sequencing Data
title De Novo Genome Assembly of Stinkhorn Mushroom Clathrus columnatus (Basidiomycota, Fungi) Using Illumina and Nanopore Sequencing Data
title_full De Novo Genome Assembly of Stinkhorn Mushroom Clathrus columnatus (Basidiomycota, Fungi) Using Illumina and Nanopore Sequencing Data
title_fullStr De Novo Genome Assembly of Stinkhorn Mushroom Clathrus columnatus (Basidiomycota, Fungi) Using Illumina and Nanopore Sequencing Data
title_full_unstemmed De Novo Genome Assembly of Stinkhorn Mushroom Clathrus columnatus (Basidiomycota, Fungi) Using Illumina and Nanopore Sequencing Data
title_short De Novo Genome Assembly of Stinkhorn Mushroom Clathrus columnatus (Basidiomycota, Fungi) Using Illumina and Nanopore Sequencing Data
title_sort de novo genome assembly of stinkhorn mushroom clathrus columnatus (basidiomycota, fungi) using illumina and nanopore sequencing data
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8830316/
https://www.ncbi.nlm.nih.gov/pubmed/35142541
http://dx.doi.org/10.1128/mra.01026-21
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