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Sparse connectivity for MAP inference in linear models using sister mitral cells
Sensory processing is hard because the variables of interest are encoded in spike trains in a relatively complex way. A major goal in studies of sensory processing is to understand how the brain extracts those variables. Here we revisit a common encoding model in which variables are encoded linearly...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8830798/ https://www.ncbi.nlm.nih.gov/pubmed/35100264 http://dx.doi.org/10.1371/journal.pcbi.1009808 |
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author | Tootoonian, Sina Schaefer, Andreas T. Latham, Peter E. |
author_facet | Tootoonian, Sina Schaefer, Andreas T. Latham, Peter E. |
author_sort | Tootoonian, Sina |
collection | PubMed |
description | Sensory processing is hard because the variables of interest are encoded in spike trains in a relatively complex way. A major goal in studies of sensory processing is to understand how the brain extracts those variables. Here we revisit a common encoding model in which variables are encoded linearly. Although there are typically more variables than neurons, this problem is still solvable because only a small number of variables appear at any one time (sparse prior). However, previous solutions require all-to-all connectivity, inconsistent with the sparse connectivity seen in the brain. Here we propose an algorithm that provably reaches the MAP (maximum a posteriori) inference solution, but does so using sparse connectivity. Our algorithm is inspired by the circuit of the mouse olfactory bulb, but our approach is general enough to apply to other modalities. In addition, it should be possible to extend it to nonlinear encoding models. |
format | Online Article Text |
id | pubmed-8830798 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-88307982022-02-11 Sparse connectivity for MAP inference in linear models using sister mitral cells Tootoonian, Sina Schaefer, Andreas T. Latham, Peter E. PLoS Comput Biol Research Article Sensory processing is hard because the variables of interest are encoded in spike trains in a relatively complex way. A major goal in studies of sensory processing is to understand how the brain extracts those variables. Here we revisit a common encoding model in which variables are encoded linearly. Although there are typically more variables than neurons, this problem is still solvable because only a small number of variables appear at any one time (sparse prior). However, previous solutions require all-to-all connectivity, inconsistent with the sparse connectivity seen in the brain. Here we propose an algorithm that provably reaches the MAP (maximum a posteriori) inference solution, but does so using sparse connectivity. Our algorithm is inspired by the circuit of the mouse olfactory bulb, but our approach is general enough to apply to other modalities. In addition, it should be possible to extend it to nonlinear encoding models. Public Library of Science 2022-01-31 /pmc/articles/PMC8830798/ /pubmed/35100264 http://dx.doi.org/10.1371/journal.pcbi.1009808 Text en © 2022 Tootoonian et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Tootoonian, Sina Schaefer, Andreas T. Latham, Peter E. Sparse connectivity for MAP inference in linear models using sister mitral cells |
title | Sparse connectivity for MAP inference in linear models using sister mitral cells |
title_full | Sparse connectivity for MAP inference in linear models using sister mitral cells |
title_fullStr | Sparse connectivity for MAP inference in linear models using sister mitral cells |
title_full_unstemmed | Sparse connectivity for MAP inference in linear models using sister mitral cells |
title_short | Sparse connectivity for MAP inference in linear models using sister mitral cells |
title_sort | sparse connectivity for map inference in linear models using sister mitral cells |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8830798/ https://www.ncbi.nlm.nih.gov/pubmed/35100264 http://dx.doi.org/10.1371/journal.pcbi.1009808 |
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