Cargando…

Ferroptosis‐related gene NOX4, CHAC1 and HIF1A are valid biomarkers for stomach adenocarcinoma

Ferroptosis is a regulated cell death nexus linking metabolism, redox biology and diseases including cancer. The aim of the present study was to identify a ferroptosis‐related gene prognostic signature for stomach adenocarcinoma (STAD) by systematic analysis of transcriptional profiles from The Canc...

Descripción completa

Detalles Bibliográficos
Autores principales: Xiao, Ruoxi, Wang, Shasha, Guo, Jing, Liu, Shihai, Ding, Aiping, Wang, Gongjun, Li, Wenqian, Zhang, Yuqi, Bian, Xiaoqian, Zhao, Shufen, Qiu, Wensheng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8831942/
https://www.ncbi.nlm.nih.gov/pubmed/35023280
http://dx.doi.org/10.1111/jcmm.17171
_version_ 1784648617390243840
author Xiao, Ruoxi
Wang, Shasha
Guo, Jing
Liu, Shihai
Ding, Aiping
Wang, Gongjun
Li, Wenqian
Zhang, Yuqi
Bian, Xiaoqian
Zhao, Shufen
Qiu, Wensheng
author_facet Xiao, Ruoxi
Wang, Shasha
Guo, Jing
Liu, Shihai
Ding, Aiping
Wang, Gongjun
Li, Wenqian
Zhang, Yuqi
Bian, Xiaoqian
Zhao, Shufen
Qiu, Wensheng
author_sort Xiao, Ruoxi
collection PubMed
description Ferroptosis is a regulated cell death nexus linking metabolism, redox biology and diseases including cancer. The aim of the present study was to identify a ferroptosis‐related gene prognostic signature for stomach adenocarcinoma (STAD) by systematic analysis of transcriptional profiles from The Cancer Genome Atlas (TCGA), GEO and a clinical cohort from our centre. We developed a predictive model based on three ferroptosis‐related genes (CHAC1, NOX4 and HIF1A), gene expression data and corresponding clinical outcomes were obtained from the TCGA database, and the reliability of this model was verified with GSE15459 and 51 queues in our centre. ROC curve showed better predictive ability using the risk score. Immune cell enrichment analysis demonstrated that the types of immune cells and their expression levels in the high‐risk group were significantly different from those in the low‐risk group. The experimental results confirmed that NOX4 was upregulated and CHAC1 was downregulated in the STAD tissues compared with the normal stomach mucosal tissues (p < 0.05). In sum, the ferroptosis‐related gene signature can accurately predict the outcomes of patients with STAD, providing valuable insights for personalized treatment. As the signature also has relevance to the immune characteristics, it may help improve the efficacy of personalized immunotherapy.
format Online
Article
Text
id pubmed-8831942
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher John Wiley and Sons Inc.
record_format MEDLINE/PubMed
spelling pubmed-88319422022-02-14 Ferroptosis‐related gene NOX4, CHAC1 and HIF1A are valid biomarkers for stomach adenocarcinoma Xiao, Ruoxi Wang, Shasha Guo, Jing Liu, Shihai Ding, Aiping Wang, Gongjun Li, Wenqian Zhang, Yuqi Bian, Xiaoqian Zhao, Shufen Qiu, Wensheng J Cell Mol Med Original Articles Ferroptosis is a regulated cell death nexus linking metabolism, redox biology and diseases including cancer. The aim of the present study was to identify a ferroptosis‐related gene prognostic signature for stomach adenocarcinoma (STAD) by systematic analysis of transcriptional profiles from The Cancer Genome Atlas (TCGA), GEO and a clinical cohort from our centre. We developed a predictive model based on three ferroptosis‐related genes (CHAC1, NOX4 and HIF1A), gene expression data and corresponding clinical outcomes were obtained from the TCGA database, and the reliability of this model was verified with GSE15459 and 51 queues in our centre. ROC curve showed better predictive ability using the risk score. Immune cell enrichment analysis demonstrated that the types of immune cells and their expression levels in the high‐risk group were significantly different from those in the low‐risk group. The experimental results confirmed that NOX4 was upregulated and CHAC1 was downregulated in the STAD tissues compared with the normal stomach mucosal tissues (p < 0.05). In sum, the ferroptosis‐related gene signature can accurately predict the outcomes of patients with STAD, providing valuable insights for personalized treatment. As the signature also has relevance to the immune characteristics, it may help improve the efficacy of personalized immunotherapy. John Wiley and Sons Inc. 2022-01-13 2022-02 /pmc/articles/PMC8831942/ /pubmed/35023280 http://dx.doi.org/10.1111/jcmm.17171 Text en © 2022 The Authors. Journal of Cellular and Molecular Medicine published by Foundation for Cellular and Molecular Medicine and John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Xiao, Ruoxi
Wang, Shasha
Guo, Jing
Liu, Shihai
Ding, Aiping
Wang, Gongjun
Li, Wenqian
Zhang, Yuqi
Bian, Xiaoqian
Zhao, Shufen
Qiu, Wensheng
Ferroptosis‐related gene NOX4, CHAC1 and HIF1A are valid biomarkers for stomach adenocarcinoma
title Ferroptosis‐related gene NOX4, CHAC1 and HIF1A are valid biomarkers for stomach adenocarcinoma
title_full Ferroptosis‐related gene NOX4, CHAC1 and HIF1A are valid biomarkers for stomach adenocarcinoma
title_fullStr Ferroptosis‐related gene NOX4, CHAC1 and HIF1A are valid biomarkers for stomach adenocarcinoma
title_full_unstemmed Ferroptosis‐related gene NOX4, CHAC1 and HIF1A are valid biomarkers for stomach adenocarcinoma
title_short Ferroptosis‐related gene NOX4, CHAC1 and HIF1A are valid biomarkers for stomach adenocarcinoma
title_sort ferroptosis‐related gene nox4, chac1 and hif1a are valid biomarkers for stomach adenocarcinoma
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8831942/
https://www.ncbi.nlm.nih.gov/pubmed/35023280
http://dx.doi.org/10.1111/jcmm.17171
work_keys_str_mv AT xiaoruoxi ferroptosisrelatedgenenox4chac1andhif1aarevalidbiomarkersforstomachadenocarcinoma
AT wangshasha ferroptosisrelatedgenenox4chac1andhif1aarevalidbiomarkersforstomachadenocarcinoma
AT guojing ferroptosisrelatedgenenox4chac1andhif1aarevalidbiomarkersforstomachadenocarcinoma
AT liushihai ferroptosisrelatedgenenox4chac1andhif1aarevalidbiomarkersforstomachadenocarcinoma
AT dingaiping ferroptosisrelatedgenenox4chac1andhif1aarevalidbiomarkersforstomachadenocarcinoma
AT wanggongjun ferroptosisrelatedgenenox4chac1andhif1aarevalidbiomarkersforstomachadenocarcinoma
AT liwenqian ferroptosisrelatedgenenox4chac1andhif1aarevalidbiomarkersforstomachadenocarcinoma
AT zhangyuqi ferroptosisrelatedgenenox4chac1andhif1aarevalidbiomarkersforstomachadenocarcinoma
AT bianxiaoqian ferroptosisrelatedgenenox4chac1andhif1aarevalidbiomarkersforstomachadenocarcinoma
AT zhaoshufen ferroptosisrelatedgenenox4chac1andhif1aarevalidbiomarkersforstomachadenocarcinoma
AT qiuwensheng ferroptosisrelatedgenenox4chac1andhif1aarevalidbiomarkersforstomachadenocarcinoma