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Prediction of prognosis in elderly patients with sepsis based on machine learning (random survival forest)
BACKGROUND: Elderly patients with sepsis have many comorbidities, and the clinical reaction is not obvious. Thus, clinical treatment is difficult. We planned to use the laboratory test results and comorbidities of elderly patients with sepsis from a large-scale public database Medical Information Ma...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8832779/ https://www.ncbi.nlm.nih.gov/pubmed/35148680 http://dx.doi.org/10.1186/s12873-022-00582-z |
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author | Zhang, Luming Huang, Tao Xu, Fengshuo Li, Shaojin Zheng, Shuai Lyu, Jun Yin, Haiyan |
author_facet | Zhang, Luming Huang, Tao Xu, Fengshuo Li, Shaojin Zheng, Shuai Lyu, Jun Yin, Haiyan |
author_sort | Zhang, Luming |
collection | PubMed |
description | BACKGROUND: Elderly patients with sepsis have many comorbidities, and the clinical reaction is not obvious. Thus, clinical treatment is difficult. We planned to use the laboratory test results and comorbidities of elderly patients with sepsis from a large-scale public database Medical Information Mart for Intensive Care (MIMIC) IV to build a random survival forest (RSF) model and to evaluate the model’s predictive value for these patients. METHODS: Clinical information of elderly patients with sepsis in MIMIC IV database was collected retrospectively. Machine learning (RSF) was used to select the top 30 variables in the training cohort to build the final RSF model. The model was compared with the traditional scoring systems SOFA, SAPSII, and APSIII. The performance of the model was evaluated by C index and calibration curve. RESULTS: A total of 6,503 patients were enrolled in the study. The top 30 important variables screened by RSF were used to construct the final RSF model. The new model provided a better C-index (0.731 in the validation cohort). The calibration curve described the agreement between the predicted probability of RSF model and the observed 30-day survival. CONCLUSIONS: We constructed a prognostic model to predict a 30-day mortality risk in elderly patients with sepsis based on machine learning (RSF algorithm), and it proved superior to the traditional scoring systems. The risk factors affecting the patients were also ranked. In addition to the common risk factors of vasopressors, ventilator use, and urine output. Newly added factors such as RDW, type of ICU unit, malignant cancer, and metastatic solid tumor also significantly influence prognosis. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12873-022-00582-z. |
format | Online Article Text |
id | pubmed-8832779 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-88327792022-02-15 Prediction of prognosis in elderly patients with sepsis based on machine learning (random survival forest) Zhang, Luming Huang, Tao Xu, Fengshuo Li, Shaojin Zheng, Shuai Lyu, Jun Yin, Haiyan BMC Emerg Med Research Article BACKGROUND: Elderly patients with sepsis have many comorbidities, and the clinical reaction is not obvious. Thus, clinical treatment is difficult. We planned to use the laboratory test results and comorbidities of elderly patients with sepsis from a large-scale public database Medical Information Mart for Intensive Care (MIMIC) IV to build a random survival forest (RSF) model and to evaluate the model’s predictive value for these patients. METHODS: Clinical information of elderly patients with sepsis in MIMIC IV database was collected retrospectively. Machine learning (RSF) was used to select the top 30 variables in the training cohort to build the final RSF model. The model was compared with the traditional scoring systems SOFA, SAPSII, and APSIII. The performance of the model was evaluated by C index and calibration curve. RESULTS: A total of 6,503 patients were enrolled in the study. The top 30 important variables screened by RSF were used to construct the final RSF model. The new model provided a better C-index (0.731 in the validation cohort). The calibration curve described the agreement between the predicted probability of RSF model and the observed 30-day survival. CONCLUSIONS: We constructed a prognostic model to predict a 30-day mortality risk in elderly patients with sepsis based on machine learning (RSF algorithm), and it proved superior to the traditional scoring systems. The risk factors affecting the patients were also ranked. In addition to the common risk factors of vasopressors, ventilator use, and urine output. Newly added factors such as RDW, type of ICU unit, malignant cancer, and metastatic solid tumor also significantly influence prognosis. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12873-022-00582-z. BioMed Central 2022-02-11 /pmc/articles/PMC8832779/ /pubmed/35148680 http://dx.doi.org/10.1186/s12873-022-00582-z Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Article Zhang, Luming Huang, Tao Xu, Fengshuo Li, Shaojin Zheng, Shuai Lyu, Jun Yin, Haiyan Prediction of prognosis in elderly patients with sepsis based on machine learning (random survival forest) |
title | Prediction of prognosis in elderly patients with sepsis based on machine learning (random survival forest) |
title_full | Prediction of prognosis in elderly patients with sepsis based on machine learning (random survival forest) |
title_fullStr | Prediction of prognosis in elderly patients with sepsis based on machine learning (random survival forest) |
title_full_unstemmed | Prediction of prognosis in elderly patients with sepsis based on machine learning (random survival forest) |
title_short | Prediction of prognosis in elderly patients with sepsis based on machine learning (random survival forest) |
title_sort | prediction of prognosis in elderly patients with sepsis based on machine learning (random survival forest) |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8832779/ https://www.ncbi.nlm.nih.gov/pubmed/35148680 http://dx.doi.org/10.1186/s12873-022-00582-z |
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