Cargando…

Viral-host RNA-RNA interactions in SARS-CoV-2: study of MIR-760-3p interactions with the genome 3'-untranslated region

Detalles Bibliográficos
Autores principales:	Frye, Caleb J., Cunningham, Caylee L., Pellegrene, Kendy A., Kensinger, Adam H., Makowski, Joseph A., Evanseck, Jeffrey D., Mihailescu, Mihaela-Rita
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Biophysical Society. Published by Elsevier Inc. 2022
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8833038/ http://dx.doi.org/10.1016/j.bpj.2021.11.1708

Ejemplares similares

Viral-host RNA-RNA interactions in SARS-CoV-2: Study of miR-34a-5p binding interactions within the genome 3'-untranslated region
por: Frye, Caleb J., et al.
Publicado: (2023)

Host microRNA interactions with the SARS-CoV-2 viral genome 3’-untranslated region
por: Frye, Caleb J., et al.
Publicado: (2023)

Conserved Elements in the 3'-UTR of SARS-CoV-2: Involvement in Genomic Dimerization and Interactions with Cellular Micrornas
por: Imperatore, Joshua A., et al.
Publicado: (2021)

Structural and dynamical impact of the two-nucleotide difference in sequence between SARS-CoV and SARS-CoV-2 s2m using molecular dynamics
por: Kensinger, Adam H., et al.
Publicado: (2022)

Delta variant versus ancestral SARS-CoV-2 s2m dynamics and relative entropy
por: Makowski, Joseph A., et al.
Publicado: (2023)

Characterization of SARS-CoV-2 Conserved Elements’ Structures and their RNA-RNA Interactions
por: Cunningham, Caylee, et al.
Publicado: (2021)

Structural and thermodynamic consequences of the G31U and U5C mutations in the SARS-CoV-2 s2m
por: Kensinger, Adam H., et al.
Publicado: (2023)

Highly conserved s2m element of SARS-CoV-2 dimerizes via a kissing complex and interacts with host miRNA-1307-3p
por: Imperatore, Joshua A, et al.
Publicado: (2021)

Stem-loop II motif (s2m) structural and dynamical differences between SARS-CoV-2 and b.1.617.2 (Delta) variant
por: Makowski, Joseph A., et al.
Publicado: (2022)

Uridylation of the histone mRNA stem-loop weakens binding interactions with SLBP while maintaining interactions with 3’hExo
por: Shine, Morgan, et al.
Publicado: (2023)

Structural, Dynamical, and Entropic Differences between SARS-CoV and SARS-CoV-2 s2m Elements Using Molecular Dynamics Simulations
por: Kensinger, Adam H., et al.
Publicado: (2022)

Characterization of the S2M G15U mutation associated with the SARS-CoV-2 delta variant
por: Cunningham, Caylee L., et al.
Publicado: (2022)

Condensed Liquid Phase 3D Structure of SARS-CoV-2 s2m Guided by NMR Spectroscopy
por: Pellegrene, Kendy A., et al.
Publicado: (2021)

Delta SARS-CoV-2 s2m Structure, Dynamics, and Entropy: Consequences of the G15U Mutation
por: Makowski, Joseph A., et al.
Publicado: (2023)

Enhanced Sampling of the SARS-CoV-2 s2m Element
por: Kensinger, Adam H., et al.
Publicado: (2021)

miR760 regulates ATXN1 levels via interaction with its 5′ untranslated region
por: Nitschke, Larissa, et al.
Publicado: (2020)

Interactions of the G quartet forming semaphorin 3F RNA with the RGG box domain of the fragile X protein family
por: Menon, Lakshmi, et al.
Publicado: (2007)

Hepatitis C virus RNA: molecular switches mediated by long-range RNA–RNA interactions?
por: Shetty, Sumangala, et al.
Publicado: (2013)

RNA Higher-Order Structures Within the Coronavirus 5′ and 3′ Untranslated Regions and Their Roles in Viral Replication
por: Liu, Pinghua, et al.
Publicado: (2009)

Spatial preferences of microRNA targets in 3' untranslated regions
por: Majoros, William H, et al.
Publicado: (2007)

Structural complexity of Dengue virus untranslated regions: cis-acting RNA motifs and pseudoknot interactions modulating functionality of the viral genome
por: Sztuba-Solinska, Joanna, et al.
Publicado: (2013)

Parameterization of the miniPEG-Modified γPNA Backbone: Toward Induced γPNA Duplex Dissociation
por: Tamez, Angel, et al.
Publicado: (2023)

Biophysical characterization of G-quadruplex forming FMR1 mRNA and of its interactions with different fragile X mental retardation protein isoforms
por: Blice-Baum, Anna C., et al.
Publicado: (2014)

Global cataloguing of variations in untranslated regions of viral genome and prediction of key host RNA binding protein-microRNA interactions modulating genome stability in SARS-CoV-2
por: Mukherjee, Moumita, et al.
Publicado: (2020)

Aberrant Regulation of Messenger RNA 3′-Untranslated Region in Human Cancer
por: López de Silanes, Isabel, et al.
Publicado: (2007)

The RNA Architecture of the SARS-CoV-2 3′-Untranslated Region
por: Zhao, Junxing, et al.
Publicado: (2020)

Molecular Analysis of RNA-RNA Interactions between 5′ and 3′ Untranslated Regions during the Initiation of Translation of a Cardiovirulent and a Live-Attenuated Coxsackievirus B3 Strains
por: Souii, Amira, et al.
Publicado: (2013)

Dehydration stress extends mRNA 3′ untranslated regions with noncoding RNA functions in Arabidopsis
por: Sun, Hai-Xi, et al.
Publicado: (2017)

The 3′ Untranslated Region of a Plant Viral RNA Directs Efficient Cap-Independent Translation in Plant and Mammalian Systems
por: Kraft, Jelena J., et al.
Publicado: (2019)

MicroRNA-296 is enriched in cancer cells and downregulates p21(WAF1) mRNA expression via interaction with its 3′ untranslated region
por: Yoon, A-rum, et al.
Publicado: (2011)

PolyC-Binding Protein 1 Interacts with 5′-Untranslated Region of Enterovirus 71 RNA in Membrane-Associated Complex to Facilitate Viral Replication
por: Luo, Zhen, et al.
Publicado: (2014)

The 3′ Untranslated Region of the Rabies Virus Glycoprotein mRNA Specifically Interacts with Cellular PCBP2 Protein and Promotes Transcript Stability
por: Palusa, Saiprasad, et al.
Publicado: (2012)

Host tRNA-Derived RNAs Target the 3′Untranslated Region of SARS-CoV-2
por: Hendrickson, Emily N., et al.
Publicado: (2022)

Expression of Versican 3′-Untranslated Region Modulates Endogenous MicroRNA Functions
por: Lee, Daniel Y., et al.
Publicado: (2010)

Challenging the Roles of NSP3 and Untranslated Regions in Rotavirus mRNA Translation
por: Gratia, Matthieu, et al.
Publicado: (2016)

Mapping the Pax6 3’ untranslated region microRNA regulatory landscape
por: Ryan, Bridget C., et al.
Publicado: (2018)

Profiling Alternative 3′ Untranslated Regions in Sorghum using RNA-seq Data
por: Tu, Min, et al.
Publicado: (2020)

In-cell SHAPE uncovers dynamic interactions between the untranslated regions of the foot-and-mouth disease virus RNA
por: Diaz-Toledano, Rosa, et al.
Publicado: (2017)

The genetic variants in 3’ untranslated region of voltage-gated sodium channel alpha 1 subunit gene affect the mRNA-microRNA interactions and associate with epilepsy
por: Li, Tian, et al.
Publicado: (2016)

RNA-Protein Interaction Analysis of SARS-CoV-2 5′ and 3′ Untranslated Regions Reveals a Role of Lysosome-Associated Membrane Protein-2a during Viral Infection
por: Verma, Rohit, et al.
Publicado: (2021)

Cannot write session to /tmp/vufind_sessions/sess_ninnioegjqn01i6f82ggb23ok0