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Noninvasive inference methods for interaction and noise intensities of coupled oscillators using only spike time data
Measurements of interaction intensity are generally achieved by observing responses to perturbations. In biological and chemical systems, external stimuli tend to deteriorate their inherent nature, and thus, it is necessary to develop noninvasive inference methods. In this paper, we propose theoreti...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
National Academy of Sciences
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8833164/ https://www.ncbi.nlm.nih.gov/pubmed/35110405 http://dx.doi.org/10.1073/pnas.2113620119 |
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author | Mori, Fumito Kori, Hiroshi |
author_facet | Mori, Fumito Kori, Hiroshi |
author_sort | Mori, Fumito |
collection | PubMed |
description | Measurements of interaction intensity are generally achieved by observing responses to perturbations. In biological and chemical systems, external stimuli tend to deteriorate their inherent nature, and thus, it is necessary to develop noninvasive inference methods. In this paper, we propose theoretical methods to infer coupling strength and noise intensity simultaneously in two well-synchronized noisy oscillators through observations of spontaneously fluctuating events such as neural spikes. A phase oscillator model is applied to derive formulae relating each of the parameters to spike time statistics. Using these formulae, each parameter is inferred from a specific set of statistics. We verify these methods using the FitzHugh–Nagumo model as well as the phase model. Our methods do not require external perturbations and thus can be applied to various experimental systems. |
format | Online Article Text |
id | pubmed-8833164 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | National Academy of Sciences |
record_format | MEDLINE/PubMed |
spelling | pubmed-88331642022-08-02 Noninvasive inference methods for interaction and noise intensities of coupled oscillators using only spike time data Mori, Fumito Kori, Hiroshi Proc Natl Acad Sci U S A Physical Sciences Measurements of interaction intensity are generally achieved by observing responses to perturbations. In biological and chemical systems, external stimuli tend to deteriorate their inherent nature, and thus, it is necessary to develop noninvasive inference methods. In this paper, we propose theoretical methods to infer coupling strength and noise intensity simultaneously in two well-synchronized noisy oscillators through observations of spontaneously fluctuating events such as neural spikes. A phase oscillator model is applied to derive formulae relating each of the parameters to spike time statistics. Using these formulae, each parameter is inferred from a specific set of statistics. We verify these methods using the FitzHugh–Nagumo model as well as the phase model. Our methods do not require external perturbations and thus can be applied to various experimental systems. National Academy of Sciences 2022-02-02 2022-02-08 /pmc/articles/PMC8833164/ /pubmed/35110405 http://dx.doi.org/10.1073/pnas.2113620119 Text en Copyright © 2022 the Author(s). Published by PNAS. https://creativecommons.org/licenses/by-nc-nd/4.0/This article is distributed under Creative Commons Attribution-NonCommercial-NoDerivatives License 4.0 (CC BY-NC-ND) (https://creativecommons.org/licenses/by-nc-nd/4.0/) . |
spellingShingle | Physical Sciences Mori, Fumito Kori, Hiroshi Noninvasive inference methods for interaction and noise intensities of coupled oscillators using only spike time data |
title | Noninvasive inference methods for interaction and noise intensities of coupled oscillators using only spike time data |
title_full | Noninvasive inference methods for interaction and noise intensities of coupled oscillators using only spike time data |
title_fullStr | Noninvasive inference methods for interaction and noise intensities of coupled oscillators using only spike time data |
title_full_unstemmed | Noninvasive inference methods for interaction and noise intensities of coupled oscillators using only spike time data |
title_short | Noninvasive inference methods for interaction and noise intensities of coupled oscillators using only spike time data |
title_sort | noninvasive inference methods for interaction and noise intensities of coupled oscillators using only spike time data |
topic | Physical Sciences |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8833164/ https://www.ncbi.nlm.nih.gov/pubmed/35110405 http://dx.doi.org/10.1073/pnas.2113620119 |
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