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A Review of Approaches for Predicting Drug–Drug Interactions Based on Machine Learning

Drug–drug interactions play a vital role in drug research. However, they may also cause adverse reactions in patients, with serious consequences. Manual detection of drug–drug interactions is time-consuming and expensive, so it is urgent to use computer methods to solve the problem. There are two wa...

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Autores principales: Han, Ke, Cao, Peigang, Wang, Yu, Xie, Fang, Ma, Jiaqi, Yu, Mengyao, Wang, Jianchun, Xu, Yaoqun, Zhang, Yu, Wan, Jie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8835726/
https://www.ncbi.nlm.nih.gov/pubmed/35153767
http://dx.doi.org/10.3389/fphar.2021.814858
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author Han, Ke
Cao, Peigang
Wang, Yu
Xie, Fang
Ma, Jiaqi
Yu, Mengyao
Wang, Jianchun
Xu, Yaoqun
Zhang, Yu
Wan, Jie
author_facet Han, Ke
Cao, Peigang
Wang, Yu
Xie, Fang
Ma, Jiaqi
Yu, Mengyao
Wang, Jianchun
Xu, Yaoqun
Zhang, Yu
Wan, Jie
author_sort Han, Ke
collection PubMed
description Drug–drug interactions play a vital role in drug research. However, they may also cause adverse reactions in patients, with serious consequences. Manual detection of drug–drug interactions is time-consuming and expensive, so it is urgent to use computer methods to solve the problem. There are two ways for computers to identify drug interactions: one is to identify known drug interactions, and the other is to predict unknown drug interactions. In this paper, we review the research progress of machine learning in predicting unknown drug interactions. Among these methods, the literature-based method is special because it combines the extraction method of DDI and the prediction method of DDI. We first introduce the common databases, then briefly describe each method, and summarize the advantages and disadvantages of some prediction models. Finally, we discuss the challenges and prospects of machine learning methods in predicting drug interactions. This review aims to provide useful guidance for interested researchers to further promote bioinformatics algorithms to predict DDI.
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spelling pubmed-88357262022-02-12 A Review of Approaches for Predicting Drug–Drug Interactions Based on Machine Learning Han, Ke Cao, Peigang Wang, Yu Xie, Fang Ma, Jiaqi Yu, Mengyao Wang, Jianchun Xu, Yaoqun Zhang, Yu Wan, Jie Front Pharmacol Pharmacology Drug–drug interactions play a vital role in drug research. However, they may also cause adverse reactions in patients, with serious consequences. Manual detection of drug–drug interactions is time-consuming and expensive, so it is urgent to use computer methods to solve the problem. There are two ways for computers to identify drug interactions: one is to identify known drug interactions, and the other is to predict unknown drug interactions. In this paper, we review the research progress of machine learning in predicting unknown drug interactions. Among these methods, the literature-based method is special because it combines the extraction method of DDI and the prediction method of DDI. We first introduce the common databases, then briefly describe each method, and summarize the advantages and disadvantages of some prediction models. Finally, we discuss the challenges and prospects of machine learning methods in predicting drug interactions. This review aims to provide useful guidance for interested researchers to further promote bioinformatics algorithms to predict DDI. Frontiers Media S.A. 2022-01-28 /pmc/articles/PMC8835726/ /pubmed/35153767 http://dx.doi.org/10.3389/fphar.2021.814858 Text en Copyright © 2022 Han, Cao, Wang, Xie, Ma, Yu, Wang, Xu, Zhang and Wan. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Pharmacology
Han, Ke
Cao, Peigang
Wang, Yu
Xie, Fang
Ma, Jiaqi
Yu, Mengyao
Wang, Jianchun
Xu, Yaoqun
Zhang, Yu
Wan, Jie
A Review of Approaches for Predicting Drug–Drug Interactions Based on Machine Learning
title A Review of Approaches for Predicting Drug–Drug Interactions Based on Machine Learning
title_full A Review of Approaches for Predicting Drug–Drug Interactions Based on Machine Learning
title_fullStr A Review of Approaches for Predicting Drug–Drug Interactions Based on Machine Learning
title_full_unstemmed A Review of Approaches for Predicting Drug–Drug Interactions Based on Machine Learning
title_short A Review of Approaches for Predicting Drug–Drug Interactions Based on Machine Learning
title_sort review of approaches for predicting drug–drug interactions based on machine learning
topic Pharmacology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8835726/
https://www.ncbi.nlm.nih.gov/pubmed/35153767
http://dx.doi.org/10.3389/fphar.2021.814858
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