Cargando…

Nuclear Transporting Factor 2 as a Novel Biomarker of Head and Neck Squamous Cell Carcinoma and Associated with T/B Cell Receptor Signaling Pathway

OBJECTIVE: This study is aimed at exploring the role of nuclear transporting factor 2 (NUTF2) in head and neck squamous cell carcinoma (HNSCC) based on The Cancer Genome Atlas (TCGA) database. METHODS: We obtained 528 HNSCC patients' clinical data from TCGA and performed expression level analys...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhang, Tingmin, Xi, Yue, Wu, Tianfu, Liu, Jianfeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8837431/
https://www.ncbi.nlm.nih.gov/pubmed/35155672
http://dx.doi.org/10.1155/2022/2885323
_version_ 1784649907937738752
author Zhang, Tingmin
Xi, Yue
Wu, Tianfu
Liu, Jianfeng
author_facet Zhang, Tingmin
Xi, Yue
Wu, Tianfu
Liu, Jianfeng
author_sort Zhang, Tingmin
collection PubMed
description OBJECTIVE: This study is aimed at exploring the role of nuclear transporting factor 2 (NUTF2) in head and neck squamous cell carcinoma (HNSCC) based on The Cancer Genome Atlas (TCGA) database. METHODS: We obtained 528 HNSCC patients' clinical data from TCGA and performed expression level analysis of NUTF2. Gene Sets Enrichment Analysis (GSEA) was conducted to identify NUTF2-associated regulatory mechanisms in HNSCC. In addition, several other tools were used to enrich the regulatory network. RESULTS: We found that NUTF2 was significantly upregulated (P < 0.001) in HNSCC. We then observed that higher NUTF2 is associated with poorer overall survival and disease-free survival. Further, by using Cox analyses, we determined high NUTF2 as an independent risk factor of predicting poorer overall survival. Tumor immune infiltration analysis revealed a significantly negative correlation between NUTF2 expression and the level of tumor infiltrated CD8(+) T cell and B cell, suggesting that NUTF2 may be involved in the immune regulation of HNSCC. Gene sets related to T/B cell receptor signaling pathways were differentially enriched based on the NUTF2 expression phenotype. KEGG pathways were used to show that NUTF2 may affect proliferation, differentiation, and immune response of T/B cell through regulating PI3K/AKT, NFκB, MAPK, and Calcium signaling pathways. CONCLUSION: NUTF2 might be a valuable biomarker for HNSCC and correlated with T/B cell receptor signaling pathway.
format Online
Article
Text
id pubmed-8837431
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Hindawi
record_format MEDLINE/PubMed
spelling pubmed-88374312022-02-12 Nuclear Transporting Factor 2 as a Novel Biomarker of Head and Neck Squamous Cell Carcinoma and Associated with T/B Cell Receptor Signaling Pathway Zhang, Tingmin Xi, Yue Wu, Tianfu Liu, Jianfeng Biomed Res Int Research Article OBJECTIVE: This study is aimed at exploring the role of nuclear transporting factor 2 (NUTF2) in head and neck squamous cell carcinoma (HNSCC) based on The Cancer Genome Atlas (TCGA) database. METHODS: We obtained 528 HNSCC patients' clinical data from TCGA and performed expression level analysis of NUTF2. Gene Sets Enrichment Analysis (GSEA) was conducted to identify NUTF2-associated regulatory mechanisms in HNSCC. In addition, several other tools were used to enrich the regulatory network. RESULTS: We found that NUTF2 was significantly upregulated (P < 0.001) in HNSCC. We then observed that higher NUTF2 is associated with poorer overall survival and disease-free survival. Further, by using Cox analyses, we determined high NUTF2 as an independent risk factor of predicting poorer overall survival. Tumor immune infiltration analysis revealed a significantly negative correlation between NUTF2 expression and the level of tumor infiltrated CD8(+) T cell and B cell, suggesting that NUTF2 may be involved in the immune regulation of HNSCC. Gene sets related to T/B cell receptor signaling pathways were differentially enriched based on the NUTF2 expression phenotype. KEGG pathways were used to show that NUTF2 may affect proliferation, differentiation, and immune response of T/B cell through regulating PI3K/AKT, NFκB, MAPK, and Calcium signaling pathways. CONCLUSION: NUTF2 might be a valuable biomarker for HNSCC and correlated with T/B cell receptor signaling pathway. Hindawi 2022-02-04 /pmc/articles/PMC8837431/ /pubmed/35155672 http://dx.doi.org/10.1155/2022/2885323 Text en Copyright © 2022 Tingmin Zhang et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Zhang, Tingmin
Xi, Yue
Wu, Tianfu
Liu, Jianfeng
Nuclear Transporting Factor 2 as a Novel Biomarker of Head and Neck Squamous Cell Carcinoma and Associated with T/B Cell Receptor Signaling Pathway
title Nuclear Transporting Factor 2 as a Novel Biomarker of Head and Neck Squamous Cell Carcinoma and Associated with T/B Cell Receptor Signaling Pathway
title_full Nuclear Transporting Factor 2 as a Novel Biomarker of Head and Neck Squamous Cell Carcinoma and Associated with T/B Cell Receptor Signaling Pathway
title_fullStr Nuclear Transporting Factor 2 as a Novel Biomarker of Head and Neck Squamous Cell Carcinoma and Associated with T/B Cell Receptor Signaling Pathway
title_full_unstemmed Nuclear Transporting Factor 2 as a Novel Biomarker of Head and Neck Squamous Cell Carcinoma and Associated with T/B Cell Receptor Signaling Pathway
title_short Nuclear Transporting Factor 2 as a Novel Biomarker of Head and Neck Squamous Cell Carcinoma and Associated with T/B Cell Receptor Signaling Pathway
title_sort nuclear transporting factor 2 as a novel biomarker of head and neck squamous cell carcinoma and associated with t/b cell receptor signaling pathway
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8837431/
https://www.ncbi.nlm.nih.gov/pubmed/35155672
http://dx.doi.org/10.1155/2022/2885323
work_keys_str_mv AT zhangtingmin nucleartransportingfactor2asanovelbiomarkerofheadandnecksquamouscellcarcinomaandassociatedwithtbcellreceptorsignalingpathway
AT xiyue nucleartransportingfactor2asanovelbiomarkerofheadandnecksquamouscellcarcinomaandassociatedwithtbcellreceptorsignalingpathway
AT wutianfu nucleartransportingfactor2asanovelbiomarkerofheadandnecksquamouscellcarcinomaandassociatedwithtbcellreceptorsignalingpathway
AT liujianfeng nucleartransportingfactor2asanovelbiomarkerofheadandnecksquamouscellcarcinomaandassociatedwithtbcellreceptorsignalingpathway