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Cross-Correlated Motions in Azidolysozyme

The changes in the local and global dynamics of azide-labelled lysozyme compared with that of the wild type protein are quantitatively assessed for all alanine residues along the polypeptide chain. Although attaching -N [Formula: see text] to alanine residues has been considered to be a minimally in...

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Detalles Bibliográficos
Autores principales: Salehi, Seyedeh Maryam, Meuwly, Markus
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8838508/
https://www.ncbi.nlm.nih.gov/pubmed/35164105
http://dx.doi.org/10.3390/molecules27030839
Descripción
Sumario:The changes in the local and global dynamics of azide-labelled lysozyme compared with that of the wild type protein are quantitatively assessed for all alanine residues along the polypeptide chain. Although attaching -N [Formula: see text] to alanine residues has been considered to be a minimally invasive change in the protein it is found that depending on the location of the alanine residue, the local and global changes in the dynamics differ. For Ala92, the change in the cross-correlated motions are minimal, whereas attaching -N [Formula: see text] to Ala90 leads to pronounced differences in the local and global correlations as quantified by the cross-correlation coefficients of the C [Formula: see text] atoms. We also demonstrate that the spectral region of the asymmetric azide stretch distinguishes between alanine attachment sites, whereas changes in the low frequency, far-infrared region are less characteristic.