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Molecular Identification of the Transient Species Mediating the Deactivation Dynamics of Solvated Guanosine and Deazaguanosine

Small structural alterations of the purine/pyrimidine core have been related to important photophysical changes, such as the loss of photostability. Similarly to canonical nucleobases, solute-solvent interactions can lead to a change in the excited state lifetimes and/or to the interplay of differen...

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Autores principales: Ortín-Fernández, Javier, González-Vázquez, Jesús, Martínez-Fernández, Lara, Corral, Inés
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8839017/
https://www.ncbi.nlm.nih.gov/pubmed/35164254
http://dx.doi.org/10.3390/molecules27030989
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author Ortín-Fernández, Javier
González-Vázquez, Jesús
Martínez-Fernández, Lara
Corral, Inés
author_facet Ortín-Fernández, Javier
González-Vázquez, Jesús
Martínez-Fernández, Lara
Corral, Inés
author_sort Ortín-Fernández, Javier
collection PubMed
description Small structural alterations of the purine/pyrimidine core have been related to important photophysical changes, such as the loss of photostability. Similarly to canonical nucleobases, solute-solvent interactions can lead to a change in the excited state lifetimes and/or to the interplay of different states in the photophysics of these modified nucleobases. To shed light on both effects, we here report a complete picture of the absorption spectra and excited state deactivation of deoxyguanosine and its closely related derivative, deoxydeazaguanosine, in water and methanol through the mapping of the excited state potential energy surfaces and molecular dynamics simulations at the TD-DFT level of theory. We show that the N by CH exchange in the imidazole ring of deoxyguanosine translates into a small red-shift of the bright states and slightly faster dynamics. In contrast, changing solvent from water to methanol implies the opposite, i.e., that the deactivation of both systems to the ground state is significantly hindered.
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spelling pubmed-88390172022-02-13 Molecular Identification of the Transient Species Mediating the Deactivation Dynamics of Solvated Guanosine and Deazaguanosine Ortín-Fernández, Javier González-Vázquez, Jesús Martínez-Fernández, Lara Corral, Inés Molecules Article Small structural alterations of the purine/pyrimidine core have been related to important photophysical changes, such as the loss of photostability. Similarly to canonical nucleobases, solute-solvent interactions can lead to a change in the excited state lifetimes and/or to the interplay of different states in the photophysics of these modified nucleobases. To shed light on both effects, we here report a complete picture of the absorption spectra and excited state deactivation of deoxyguanosine and its closely related derivative, deoxydeazaguanosine, in water and methanol through the mapping of the excited state potential energy surfaces and molecular dynamics simulations at the TD-DFT level of theory. We show that the N by CH exchange in the imidazole ring of deoxyguanosine translates into a small red-shift of the bright states and slightly faster dynamics. In contrast, changing solvent from water to methanol implies the opposite, i.e., that the deactivation of both systems to the ground state is significantly hindered. MDPI 2022-02-01 /pmc/articles/PMC8839017/ /pubmed/35164254 http://dx.doi.org/10.3390/molecules27030989 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Ortín-Fernández, Javier
González-Vázquez, Jesús
Martínez-Fernández, Lara
Corral, Inés
Molecular Identification of the Transient Species Mediating the Deactivation Dynamics of Solvated Guanosine and Deazaguanosine
title Molecular Identification of the Transient Species Mediating the Deactivation Dynamics of Solvated Guanosine and Deazaguanosine
title_full Molecular Identification of the Transient Species Mediating the Deactivation Dynamics of Solvated Guanosine and Deazaguanosine
title_fullStr Molecular Identification of the Transient Species Mediating the Deactivation Dynamics of Solvated Guanosine and Deazaguanosine
title_full_unstemmed Molecular Identification of the Transient Species Mediating the Deactivation Dynamics of Solvated Guanosine and Deazaguanosine
title_short Molecular Identification of the Transient Species Mediating the Deactivation Dynamics of Solvated Guanosine and Deazaguanosine
title_sort molecular identification of the transient species mediating the deactivation dynamics of solvated guanosine and deazaguanosine
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8839017/
https://www.ncbi.nlm.nih.gov/pubmed/35164254
http://dx.doi.org/10.3390/molecules27030989
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