Cargando…

Preprocessing Strategies for Sparse Infrared Spectroscopy: A Case Study on Cartilage Diagnostics

The aim of the study was to optimize preprocessing of sparse infrared spectral data. The sparse data were obtained by reducing broadband Fourier transform infrared attenuated total reflectance spectra of bovine and human cartilage, as well as of simulated spectral data, comprising several thousand s...

Descripción completa

Detalles Bibliográficos
Autores principales:	Tafintseva, Valeria, Lintvedt, Tiril Aurora, Solheim, Johanne Heitmann, Zimmermann, Boris, Rehman, Hafeez Ur, Virtanen, Vesa, Shaikh, Rubina, Nippolainen, Ervin, Afara, Isaac, Saarakkala, Simo, Rieppo, Lassi, Krebs, Patrick, Fomina, Polina, Mizaikoff, Boris, Kohler, Achim
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	MDPI 2022
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8839829/ https://www.ncbi.nlm.nih.gov/pubmed/35164133 http://dx.doi.org/10.3390/molecules27030873

Ejemplares similares

Preclassification of Broadband and Sparse Infrared Data by Multiplicative Signal Correction Approach
por: Rehman, Hafeez Ur, et al.
Publicado: (2022)

Near Infrared Spectroscopy Enables Differentiation of Mechanically and Enzymatically Induced Cartilage Injuries
por: Nippolainen, Ervin, et al.
Publicado: (2020)

Characterisation of Cartilage Damage via Fusing Mid-Infrared, Near-Infrared, and Raman Spectroscopic Data
por: Shaikh, Rubina, et al.
Publicado: (2023)

Infrared spectroscopy is suitable for objective assessment of articular cartilage health
por: Virtanen, V., et al.
Publicado: (2022)

Combination of optical coherence tomography and near infrared spectroscopy enhances determination of articular cartilage composition and structure
por: Sarin, Jaakko K., et al.
Publicado: (2017)

Fourier Transform Infrared Spectroscopic Imaging and Multivariate Regression for Prediction of Proteoglycan Content of Articular Cartilage
por: Rieppo, Lassi, et al.
Publicado: (2012)

Diagnostic performance of attenuated total reflection Fourier-transform infrared spectroscopy for detecting COVID-19 from routine nasopharyngeal swab samples
por: Heino, Helinä, et al.
Publicado: (2022)

Assessment of Ligament Viscoelastic Properties Using Raman Spectroscopy
por: Cui, Andy, et al.
Publicado: (2022)

The Use of Constituent Spectra and Weighting in Extended Multiplicative Signal Correction in Infrared Spectroscopy
por: Solheim, Johanne Heitmann, et al.
Publicado: (2022)

Orientation anisotropy of quantitative MRI relaxation parameters in ordered tissue
por: Hänninen, Nina, et al.
Publicado: (2017)

Micro-computed Tomography-Based Collagen Orientation and Anisotropy Analysis of Rabbit Articular Cartilage
por: Ojanen, Simo P., et al.
Publicado: (2023)

Histochemical quantification of collagen content in articular cartilage
por: Rieppo, Lassi, et al.
Publicado: (2019)

Quantitative susceptibility mapping of articular cartilage: Ex vivo findings at multiple orientations and following different degradation treatments
por: Nykänen, Olli, et al.
Publicado: (2018)

Raman Spectroscopy and Machine Learning Enables Estimation of Articular Cartilage Structural, Compositional, and Functional Properties
por: Shehata, Eslam, et al.
Publicado: (2023)

Dataset on equine cartilage near infrared spectra, composition, and functional properties
por: Sarin, Jaakko K., et al.
Publicado: (2019)

Scalable preprocessing for sparse scRNA-seq data exploiting prior knowledge
por: Mukherjee, Sumit, et al.
Publicado: (2018)

Effects of Articular Cartilage Constituents on Phosphotungstic Acid Enhanced Micro-Computed Tomography
por: Karhula, Sakari S., et al.
Publicado: (2017)

Impact of experimental setup parameters on the measurement of articular cartilage optical properties in the visible and short near-infrared spectral bands
por: Kafian-Attari, Iman, et al.
Publicado: (2023)

Image Preprocessing in Classification and Identification of Diabetic Eye Diseases
por: Sarki, Rubina, et al.
Publicado: (2021)

Preprocessing of emotional visual information in the human piriform cortex
por: Schulze, Patrick, et al.
Publicado: (2017)

Machine Learning Classification of Articular Cartilage Integrity Using Near Infrared Spectroscopy
por: Afara, Isaac O., et al.
Publicado: (2020)

Visible and Near-Infrared Spectroscopy Enables Differentiation of Normal and Early Osteoarthritic Human Knee Joint Articular Cartilage
por: Linus, Awuniji, et al.
Publicado: (2023)

Feasibility of In-Line Raman Spectroscopy for Quality Assessment in Food Industry: How Fast Can We Go?
por: Lintvedt, Tiril Aurora, et al.
Publicado: (2022)

Preprocessing for quadratic programming
por: Gould, N I M, et al.
Publicado: (2002)

The effect of deformation of absorbing scatterers on Mie-type signatures in infrared microspectroscopy
por: Brandsrud, Maren Anna, et al.
Publicado: (2021)

Advanced mid-infrared lightsources above and beyond lasers and their analytical utility
por: Hlavatsch, Michael, et al.
Publicado: (2022)

Imaging of Osteoarthritic Human Articular Cartilage using Fourier Transform Infrared Microspectroscopy Combined with Multivariate and Univariate Analysis
por: Oinas, J., et al.
Publicado: (2016)

Direct infrared spectroscopy for the size-independent identification and quantification of respirable particles relative mass in mine dusts
por: Stach, Robert, et al.
Publicado: (2020)

Data preprocessing in data mining
por: García, Salvador, et al.
Publicado: (2015)

Preprocessing NIR Spectra for Aquaphotomics
por: Roger, Jean-Michel, et al.
Publicado: (2022)

Suitable Cathode NMP Replacement for Efficient Sustainable Printed Li-Ion Batteries
por: Sliz, Rafal, et al.
Publicado: (2022)

A Portable Infrared Attenuated Total Reflection Spectrometer for Food Analysis
por: Fomina, Polina, et al.
Publicado: (2023)

Specificity of Fourier Transform Infrared (FTIR) Microspectroscopy to Estimate Depth-Wise Proteoglycan Content in Normal and Osteoarthritic Human Articular Cartilage
por: Saarakkala, Simo, et al.
Publicado: (2010)

Automatic Grading of Individual Knee Osteoarthritis Features in Plain Radiographs Using Deep Convolutional Neural Networks
por: Tiulpin, Aleksei, et al.
Publicado: (2020)

Mid-infrared GaAs/AlGaAs micro-ring resonators characterized via thermal tuning
por: Haas, Julian, et al.
Publicado: (2019)

Development of Silica Nanoparticle Supported Imprinted Polymers for Selective Lysozyme Recognition
por: Kotyrba, Anika, et al.
Publicado: (2021)

Rational In Silico Design of Molecularly Imprinted Polymers: Current Challenges and Future Potential
por: Rajpal, Soumya, et al.
Publicado: (2023)

TRT Preprocessing-Algorithm, Implementations and Benchmarks
por: Bock, R, et al.
Publicado: (1997)

Quality control and preprocessing of metagenomic datasets
por: Schmieder, Robert, et al.
Publicado: (2011)

A preprocessing strategy for helioseismic inversions
por: Christensen-Dalsgaard, J, et al.
Publicado: (1992)

Cannot write session to /tmp/vufind_sessions/sess_1c0blujma8fdfdh6s1cjij2jm6