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Artificial intelligence in clinical and translational science: Successes, challenges and opportunities

Artificial intelligence (AI) is transforming many domains, including finance, agriculture, defense, and biomedicine. In this paper, we focus on the role of AI in clinical and translational research (CTR), including preclinical research (T1), clinical research (T2), clinical implementation (T3), and...

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Autores principales: Bernstam, Elmer V., Shireman, Paula K., Meric‐Bernstam, Funda, N. Zozus, Meredith, Jiang, Xiaoqian, Brimhall, Bradley B., Windham, Ashley K., Schmidt, Susanne, Visweswaran, Shyam, Ye, Ye, Goodrum, Heath, Ling, Yaobin, Barapatre, Seemran, Becich, Michael J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8841416/
https://www.ncbi.nlm.nih.gov/pubmed/34706145
http://dx.doi.org/10.1111/cts.13175
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author Bernstam, Elmer V.
Shireman, Paula K.
Meric‐Bernstam, Funda
N. Zozus, Meredith
Jiang, Xiaoqian
Brimhall, Bradley B.
Windham, Ashley K.
Schmidt, Susanne
Visweswaran, Shyam
Ye, Ye
Goodrum, Heath
Ling, Yaobin
Barapatre, Seemran
Becich, Michael J.
author_facet Bernstam, Elmer V.
Shireman, Paula K.
Meric‐Bernstam, Funda
N. Zozus, Meredith
Jiang, Xiaoqian
Brimhall, Bradley B.
Windham, Ashley K.
Schmidt, Susanne
Visweswaran, Shyam
Ye, Ye
Goodrum, Heath
Ling, Yaobin
Barapatre, Seemran
Becich, Michael J.
author_sort Bernstam, Elmer V.
collection PubMed
description Artificial intelligence (AI) is transforming many domains, including finance, agriculture, defense, and biomedicine. In this paper, we focus on the role of AI in clinical and translational research (CTR), including preclinical research (T1), clinical research (T2), clinical implementation (T3), and public (or population) health (T4). Given the rapid evolution of AI in CTR, we present three complementary perspectives: (1) scoping literature review, (2) survey, and (3) analysis of federally funded projects. For each CTR phase, we addressed challenges, successes, failures, and opportunities for AI. We surveyed Clinical and Translational Science Award (CTSA) hubs regarding AI projects at their institutions. Nineteen of 63 CTSA hubs (30%) responded to the survey. The most common funding source (48.5%) was the federal government. The most common translational phase was T2 (clinical research, 40.2%). Clinicians were the intended users in 44.6% of projects and researchers in 32.3% of projects. The most common computational approaches were supervised machine learning (38.6%) and deep learning (34.2%). The number of projects steadily increased from 2012 to 2020. Finally, we analyzed 2604 AI projects at CTSA hubs using the National Institutes of Health Research Portfolio Online Reporting Tools (RePORTER) database for 2011–2019. We mapped available abstracts to medical subject headings and found that nervous system (16.3%) and mental disorders (16.2) were the most common topics addressed. From a computational perspective, big data (32.3%) and deep learning (30.0%) were most common. This work represents a snapshot in time of the role of AI in the CTSA program.
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spelling pubmed-88414162022-02-22 Artificial intelligence in clinical and translational science: Successes, challenges and opportunities Bernstam, Elmer V. Shireman, Paula K. Meric‐Bernstam, Funda N. Zozus, Meredith Jiang, Xiaoqian Brimhall, Bradley B. Windham, Ashley K. Schmidt, Susanne Visweswaran, Shyam Ye, Ye Goodrum, Heath Ling, Yaobin Barapatre, Seemran Becich, Michael J. Clin Transl Sci Reviews Artificial intelligence (AI) is transforming many domains, including finance, agriculture, defense, and biomedicine. In this paper, we focus on the role of AI in clinical and translational research (CTR), including preclinical research (T1), clinical research (T2), clinical implementation (T3), and public (or population) health (T4). Given the rapid evolution of AI in CTR, we present three complementary perspectives: (1) scoping literature review, (2) survey, and (3) analysis of federally funded projects. For each CTR phase, we addressed challenges, successes, failures, and opportunities for AI. We surveyed Clinical and Translational Science Award (CTSA) hubs regarding AI projects at their institutions. Nineteen of 63 CTSA hubs (30%) responded to the survey. The most common funding source (48.5%) was the federal government. The most common translational phase was T2 (clinical research, 40.2%). Clinicians were the intended users in 44.6% of projects and researchers in 32.3% of projects. The most common computational approaches were supervised machine learning (38.6%) and deep learning (34.2%). The number of projects steadily increased from 2012 to 2020. Finally, we analyzed 2604 AI projects at CTSA hubs using the National Institutes of Health Research Portfolio Online Reporting Tools (RePORTER) database for 2011–2019. We mapped available abstracts to medical subject headings and found that nervous system (16.3%) and mental disorders (16.2) were the most common topics addressed. From a computational perspective, big data (32.3%) and deep learning (30.0%) were most common. This work represents a snapshot in time of the role of AI in the CTSA program. John Wiley and Sons Inc. 2021-10-30 2022-02 /pmc/articles/PMC8841416/ /pubmed/34706145 http://dx.doi.org/10.1111/cts.13175 Text en © 2021 The Authors. Clinical and Translational Science published by Wiley Periodicals LLC on behalf of American Society for Clinical Pharmacology and Therapeutics. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Reviews
Bernstam, Elmer V.
Shireman, Paula K.
Meric‐Bernstam, Funda
N. Zozus, Meredith
Jiang, Xiaoqian
Brimhall, Bradley B.
Windham, Ashley K.
Schmidt, Susanne
Visweswaran, Shyam
Ye, Ye
Goodrum, Heath
Ling, Yaobin
Barapatre, Seemran
Becich, Michael J.
Artificial intelligence in clinical and translational science: Successes, challenges and opportunities
title Artificial intelligence in clinical and translational science: Successes, challenges and opportunities
title_full Artificial intelligence in clinical and translational science: Successes, challenges and opportunities
title_fullStr Artificial intelligence in clinical and translational science: Successes, challenges and opportunities
title_full_unstemmed Artificial intelligence in clinical and translational science: Successes, challenges and opportunities
title_short Artificial intelligence in clinical and translational science: Successes, challenges and opportunities
title_sort artificial intelligence in clinical and translational science: successes, challenges and opportunities
topic Reviews
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8841416/
https://www.ncbi.nlm.nih.gov/pubmed/34706145
http://dx.doi.org/10.1111/cts.13175
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