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Development of a β-Variational Autoencoder for Disentangled Latent Space Representation of Anterior Segment Optical Coherence Tomography Images
PURPOSE: To investigate the feasibility of extracting a low-dimensional latent structure of anterior segment optical coherence tomography (AS-OCT) images by use of a β-variational autoencoder (β-VAE). METHODS: We retrospectively collected 2111 AS-OCT images from 2111 eyes of 1261 participants from t...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Association for Research in Vision and Ophthalmology
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8842480/ https://www.ncbi.nlm.nih.gov/pubmed/35133405 http://dx.doi.org/10.1167/tvst.11.2.11 |
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author | Shon, Kilhwan Sung, Kyung Rim Kwak, Jiehoon Shin, Joong Won Lee, Joo Yeon |
author_facet | Shon, Kilhwan Sung, Kyung Rim Kwak, Jiehoon Shin, Joong Won Lee, Joo Yeon |
author_sort | Shon, Kilhwan |
collection | PubMed |
description | PURPOSE: To investigate the feasibility of extracting a low-dimensional latent structure of anterior segment optical coherence tomography (AS-OCT) images by use of a β-variational autoencoder (β-VAE). METHODS: We retrospectively collected 2111 AS-OCT images from 2111 eyes of 1261 participants from the ongoing Asan Glaucoma Progression Study. After hyperparameter optimization, the images were analyzed with β-VAE. RESULTS: The mean participant age was 64.4 years, with mean values of visual field index and mean deviation of 86.4% and −5.33 dB, respectively. After experiments, a latent space size of 6 and β value of 5(3) were selected for latent space analysis with β-VAE. Latent variables were successfully disentangled, showing readily interpretable distinct characteristics, such as the overall depth and area of the anterior chamber (η1), pupil diameter (η2), iris profile (η3 and η4), and corneal curvature (η5). CONCLUSIONS: β-VAE can successfully be applied for disentangled latent space representation of AS-OCT images, revealing the high possibility of applying unsupervised learning in the medical image analysis. TRANSLATIONAL RELEVANCE: This study demonstrates that a deep learning–based latent space model can be applied for the analysis of AS-OCT images. |
format | Online Article Text |
id | pubmed-8842480 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | The Association for Research in Vision and Ophthalmology |
record_format | MEDLINE/PubMed |
spelling | pubmed-88424802022-02-18 Development of a β-Variational Autoencoder for Disentangled Latent Space Representation of Anterior Segment Optical Coherence Tomography Images Shon, Kilhwan Sung, Kyung Rim Kwak, Jiehoon Shin, Joong Won Lee, Joo Yeon Transl Vis Sci Technol Article PURPOSE: To investigate the feasibility of extracting a low-dimensional latent structure of anterior segment optical coherence tomography (AS-OCT) images by use of a β-variational autoencoder (β-VAE). METHODS: We retrospectively collected 2111 AS-OCT images from 2111 eyes of 1261 participants from the ongoing Asan Glaucoma Progression Study. After hyperparameter optimization, the images were analyzed with β-VAE. RESULTS: The mean participant age was 64.4 years, with mean values of visual field index and mean deviation of 86.4% and −5.33 dB, respectively. After experiments, a latent space size of 6 and β value of 5(3) were selected for latent space analysis with β-VAE. Latent variables were successfully disentangled, showing readily interpretable distinct characteristics, such as the overall depth and area of the anterior chamber (η1), pupil diameter (η2), iris profile (η3 and η4), and corneal curvature (η5). CONCLUSIONS: β-VAE can successfully be applied for disentangled latent space representation of AS-OCT images, revealing the high possibility of applying unsupervised learning in the medical image analysis. TRANSLATIONAL RELEVANCE: This study demonstrates that a deep learning–based latent space model can be applied for the analysis of AS-OCT images. The Association for Research in Vision and Ophthalmology 2022-02-08 /pmc/articles/PMC8842480/ /pubmed/35133405 http://dx.doi.org/10.1167/tvst.11.2.11 Text en Copyright 2022 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License. |
spellingShingle | Article Shon, Kilhwan Sung, Kyung Rim Kwak, Jiehoon Shin, Joong Won Lee, Joo Yeon Development of a β-Variational Autoencoder for Disentangled Latent Space Representation of Anterior Segment Optical Coherence Tomography Images |
title | Development of a β-Variational Autoencoder for Disentangled Latent Space Representation of Anterior Segment Optical Coherence Tomography Images |
title_full | Development of a β-Variational Autoencoder for Disentangled Latent Space Representation of Anterior Segment Optical Coherence Tomography Images |
title_fullStr | Development of a β-Variational Autoencoder for Disentangled Latent Space Representation of Anterior Segment Optical Coherence Tomography Images |
title_full_unstemmed | Development of a β-Variational Autoencoder for Disentangled Latent Space Representation of Anterior Segment Optical Coherence Tomography Images |
title_short | Development of a β-Variational Autoencoder for Disentangled Latent Space Representation of Anterior Segment Optical Coherence Tomography Images |
title_sort | development of a β-variational autoencoder for disentangled latent space representation of anterior segment optical coherence tomography images |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8842480/ https://www.ncbi.nlm.nih.gov/pubmed/35133405 http://dx.doi.org/10.1167/tvst.11.2.11 |
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